Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1113 |
Symbol | |
ID | 4277034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1313849 |
End bp | 1314970 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133887 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_749804 |
Protein GI | 114562291 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.686108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTAA AGAAAATCAA TTTATTAGAT CTTGATCGTA AAGGACTACG GGCGTTGTTC AGTGAAATGG GCGAAAAACC GTTTCGTGCC GATCAGTTAA TGAAGTGGGT TTATCACTTT GGTGTTACTG ACTTTGAAGA AATGAACAAC ATAAACAAAG TGTTGCGTAC CAAGCTTGCA GCAAAGTGTG AAATAGTTGC GCCTGAAATT GCGAGTTTTC AAAAGTCGAA TGATGGCACT ATTAAATTTG CTATCAATGT TGGCCAAGGC CAAGAAGTTG AAACCGTATA CATTCCTGAA GAAGACCGTG CGACCTTGTG TGTATCATCA CAAGTCGGCT GTGCTTTAGA ATGTACTTTC TGCTCAACGG GCCAACAAGG TTTTAATCGT AACTTAACGG TATCTGAAAT TATTGGCCAA GTTTGGCGTG TATCGCAATT TTTAGGTTTC CACAAAGATA CTGGCGATCG ACCAATTTCT AACGTAGTGA TGATGGGTAT GGGTGAGCCT TTGCTTAACC TTGCTAACGT GATCCCTGCG ATGGATATTA TGCTAGATGA TTTTGGTTTT AGTTTATCTA AACGTCGAGT GACGTTATCA ACTTCTGGTG TAGTACCTGC ACTTGATAAA TTAGGTGACG CCATTGACGT CGCACTAGCG GTAAGTATTC ATGCACCTAA TGATGAACTG CGCGATGTGT TGGTTCCAGT TAATAAAAAA TATCCATTAC AAGAATTTTT AGCGGGCATT CGTCGCTATT TAGAAAAGTC TAATGCAAAT CGCGGCCGCG TGACGGTTGA ATATGTCATG CTTGATCATA TTAATGACAG CACAGACCAA GCGCATGAAC TCGCGATACT AATGAAAGAT ACTCCATGTA AGATTAACTT AATCCCGTTT AACCCGTATC CTGGTTCTCC TTACGGTCGT TCATCTAACT CACGCATAGA TCGTTTTTCT AAAGTGTTGA TGGAACATGG CCTAACAGTG ATTGTTCGTA AAACCCGTGG TGATGATATT GATGCTGCTT GTGGCCAATT AGCCGGTGAT ATTCGTGATA GAACAAAGCG TTTAGCAAAA AAACAAATGC AACAGAATCA GATTTCAGTC ACAATGGAAT AA
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Protein sequence | MSVKKINLLD LDRKGLRALF SEMGEKPFRA DQLMKWVYHF GVTDFEEMNN INKVLRTKLA AKCEIVAPEI ASFQKSNDGT IKFAINVGQG QEVETVYIPE EDRATLCVSS QVGCALECTF CSTGQQGFNR NLTVSEIIGQ VWRVSQFLGF HKDTGDRPIS NVVMMGMGEP LLNLANVIPA MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDAIDVALA VSIHAPNDEL RDVLVPVNKK YPLQEFLAGI RRYLEKSNAN RGRVTVEYVM LDHINDSTDQ AHELAILMKD TPCKINLIPF NPYPGSPYGR SSNSRIDRFS KVLMEHGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK KQMQQNQISV TME
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