| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1102 |
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| Symbol | |
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| ID | 4277165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1302210 |
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| End bp | 1303526 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133876 |
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| Product | isocitrate lyase |
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| Protein accession | YP_749793 |
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| Protein GI | 114562280 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAC AACTAACTCG TCAGCAACAG GTTGATGCAA TTAAGAAAGA TTGGGCTGAA
AATCCACGTT GGAAATCGGT TAAGCGTCCT TTTACTGCTG AAGAAGTTGT CGCATTACGT
GGCTCTGTTG TGCCAGAAAA TACCATTGCT AAAATGGGTG CTGCAAAATT GTGGGAACTG
GTTAACGGCG GCGCTAAAAA AGGCTACGTA AACTCACTGG GCGCACTTAC TGGTGGTCAA
GCTGTACAGC AAGCAAAAGC GGGAATAGAA GCGATTTACT TATCAGGCTG GCAGGTAGCT
GCTGACGCTA ACTTAGCGGG CACAATGTAT CCAGACCAAT CACTTTACCC AGCAAACTCA
GTACCTGCAG TTGTGAGCCG TATTAATAAC TCATTTCGCC GTGCTGACCA GATTCAATGG
GGCAAAGAAG TAAATCCTGG TGATGACAAT TACACTGACT ATTTCCTACC TATCGTTGCT
GATGCAGAAG CCGGTTTTGG TGGTGTATTG AATGCATTTG AACTAATGAA GTCGATGATT
GATGCTGGTG CTGCAGGTGT TCACTTTGAA GACCAATTAG CGTCTGTTAA GAAGTGTGGT
CACATGGGCG GTAAAGTCCT CGTACCAACT CAAGAAGCGG TACAAAAGTT AGTTGCTGCA
CGTTTAGCGG CAGATGTCAG TGGTGTTGAT ACCTTGGTTA TTGCACGTAC AGATGCTAAT
GCTGCTGATT TGATGACTTC AGATTGTGAT GAATATGACC GTGAGTTTGT TACTGGTGAA
CGTACTAACG AAGGTTTCTA CCGCGTTAGA GCTGGTTTAG ACCAAGCTAT TTCACGTGGT
CTTGCTTATG CTCCTTATGC TGATTTAATT TGGTGTGAAA CAGCTAAACC TTGTCTTGAA
GAAGCGAAGA AATTTGCTGA TGCCATTCAT GCACAGTATC CAGATCAACT ACTTGCTTAT
AACTGTTCAC CTTCGTTCAA CTGGAAGAAG AACTTGGATG ACGTTACGAT TGCTAAGTTC
CAGCAAGAGT TGTCTAACAT GGGCTACAAG TACCAGTTCA TCACGTTAGC GGGCATTCAT
AACATGTGGT ACAACATGTT CGATTTAGCC TATGACTACG CACGTGGTGA AGGCATGAAG
CATTATGTTG AAAAAGTACA AGAGCTTGAA TTTGCTGCTG CTAAGAAAGG TTATACCTTC
GTATCGCACC AGCAAGAAGT GGGCACAGGT TACTTTGACC AAGTGACTAC GTGTATTCAA
GGCGGTAAAT CGTCAGTAAC AGCGCTAACG GGCTCTACTG AAGAAGAACA GTTTTAA
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| Protein sequence | MTTQLTRQQQ VDAIKKDWAE NPRWKSVKRP FTAEEVVALR GSVVPENTIA KMGAAKLWEL
VNGGAKKGYV NSLGALTGGQ AVQQAKAGIE AIYLSGWQVA ADANLAGTMY PDQSLYPANS
VPAVVSRINN SFRRADQIQW GKEVNPGDDN YTDYFLPIVA DAEAGFGGVL NAFELMKSMI
DAGAAGVHFE DQLASVKKCG HMGGKVLVPT QEAVQKLVAA RLAADVSGVD TLVIARTDAN
AADLMTSDCD EYDREFVTGE RTNEGFYRVR AGLDQAISRG LAYAPYADLI WCETAKPCLE
EAKKFADAIH AQYPDQLLAY NCSPSFNWKK NLDDVTIAKF QQELSNMGYK YQFITLAGIH
NMWYNMFDLA YDYARGEGMK HYVEKVQELE FAAAKKGYTF VSHQQEVGTG YFDQVTTCIQ
GGKSSVTALT GSTEEEQF
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