| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1101 |
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| Symbol | |
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| ID | 4277164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1300467 |
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| End bp | 1302119 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133875 |
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| Product | malate synthase |
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| Protein accession | YP_749792 |
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| Protein GI | 114562279 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.70371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCAG AACAATTAGT AGCTCAATAC AGTAAGTCCA CAGCAAGTCG TGATGATTCG
GTTAAAACTG ATCTCACGTT TATTGGGCCT ACTGTTAATG GCCAAGAAGA AGTTTTTAAC
TCTGGTGCCG TGGCTTTCCT TGATTCGTTA TGTGCAAAAT TTGTTGATGA AGTACCCGAG
CTATTAGCTA AGCGTAAGCA AAAACAAGCC CGTATTGATA ATGGTGAGTT ACCTGATTTT
TTACCTGAAA CTCGTGCAAT TCGTGATGGT AATTGGACTA TCCGTGGAAT GCCTGAAGAT
CTCACTGATA GACGTGTTGA AATTACCGGC CCTGTTGATC GTAAGATGAT CATCAATGCT
TTAAACGCTA ATGTAAAAGT GTTTATGGCC GACTTTGAGG ATTCATTAGC ACCGAGTTGG
CAAAAAATTG TCGAAGGACA AATTAACCTT CGTGATGCCG TGCGCGGTGA TATTGAACTA
ACTGTCCCTG AAACAGGTAA GCATTATTCG TTAAATCCGG ATCCTGCAGT GTTAATTGCT
CGTGTACGTG GTTTGCATCT TATTGAAAAG CACATTGAAT ACAAAGGCAA ACCCATTCCT
GGCGGCTTAG TCGATTTTGC TATGTACTTT TACCATAATT ATCGTCAACT TTTAGCTAAA
AAATCTGGAC CTTACTTTTA TATTCCTAAG TTAGAAAGCC ATATAGAAGC GCGTTGGTGG
GCGAAAATGT TTGCCTTTGT AGAAGAACGT TTTTGCTTAC AGCCTGGCAC CATTAAATGT
ACTTGTTTAA TTGAAACATT ACCTGCGGTA TTTGAAATGG AGGAGATTCT TTATGAACTT
CGTTCAAACA TTGTCGCGCT GAATTGTGGC CGTTGGGATT ATATCTTCAG CTACATCAAA
ACCTTAAAGA ACTATCCTGA TCGTGTGCTA CCCGACCGTC AAGCGGTAAC TATGGATACT
AAATTTTTAA GTGCCTATTC ACGCTTATTG ATTAAAACTT GCCATAAACG TGGCGCATTA
GCCATGGGCG GAATGGCAGC ATTTATTCCT GCCAAAGATG AAGCAACTAA CGAACTGGTA
TTACAAAAAG TACGTGGCGA TAAGGAGTTA GAAGCTCGCA ATGGTCATGA TGGTACTTGG
GTTGCTCATC CGGGTTTAGC CGACACAGCG ATGAAAATTT TCAATGATTA CATCGGTGGC
GATAGAACCA ATCAATTACA CATTACTCGT GATGTCGATG CACCCATTTT AGCCAGCGAA
TTACTCGAGC CTTGTCAAGG CGAGCGAACT GAAGCGGGTA TGCGGTTGAA CATTCGTATT
GCGTTGCAGT ACATCGAAGC GTGGATCCAG GGCAATGGTT GCGTACCGAT TTACGGTTTG
ATGGAAGATG CTGCCACAGC AGAAATATCG CGTACTTCTA TTTGGCAATG GATCCAGCAT
GGTAAAAGTT TATCCAATGG CAAACTGGTC ACTAAAGCAT TGTTTAAAGA CATGTTGAAA
GAGGAAACGG CCAACGTGAA AAAGGAACTT GGCGCGGAGC GTTTTAATGC AGGTGAGTTC
GCCAAAGCGG CAGAATTATT TGAACAAATT ACTACCTCTG ATGAGCTAGT CGATTTCTTA
ACATTACCAG GATATGAACT GTTAACGGCG TAA
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| Protein sequence | MTAEQLVAQY SKSTASRDDS VKTDLTFIGP TVNGQEEVFN SGAVAFLDSL CAKFVDEVPE
LLAKRKQKQA RIDNGELPDF LPETRAIRDG NWTIRGMPED LTDRRVEITG PVDRKMIINA
LNANVKVFMA DFEDSLAPSW QKIVEGQINL RDAVRGDIEL TVPETGKHYS LNPDPAVLIA
RVRGLHLIEK HIEYKGKPIP GGLVDFAMYF YHNYRQLLAK KSGPYFYIPK LESHIEARWW
AKMFAFVEER FCLQPGTIKC TCLIETLPAV FEMEEILYEL RSNIVALNCG RWDYIFSYIK
TLKNYPDRVL PDRQAVTMDT KFLSAYSRLL IKTCHKRGAL AMGGMAAFIP AKDEATNELV
LQKVRGDKEL EARNGHDGTW VAHPGLADTA MKIFNDYIGG DRTNQLHITR DVDAPILASE
LLEPCQGERT EAGMRLNIRI ALQYIEAWIQ GNGCVPIYGL MEDAATAEIS RTSIWQWIQH
GKSLSNGKLV TKALFKDMLK EETANVKKEL GAERFNAGEF AKAAELFEQI TTSDELVDFL
TLPGYELLTA
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