| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1092 |
|---|
| Symbol | |
|---|
| ID | 4277626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1290796 |
|---|
| End bp | 1291140 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638133866 |
|---|
| Product | alkylphosphonate utilization operon protein PhnA |
|---|
| Protein accession | YP_749783 |
|---|
| Protein GI | 114562270 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism |
|---|
| TIGRFAM ID | [TIGR00686] alkylphosphonate utilization operon protein PhnA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATG TAATCCCGCC ATGCCCAAAA TGTGAGTCTC CGTACGCTTA TTCAGACGGC
ACATTGTTAA TTTGCCCAGA ATGCGCCAAT GAATGGAACC CAAATGAAGA AGTGGTTGAT
CCAGACGCCA TCATTTTAAA AGATGCCAAC GGCAATTTAT TAGCAGAAGG CGACAAAGTC
ACCTTAATCA AAGACCTTAA AGTAAAAGGT TCATCACTCG TGCTTAAAGT CGGCACTAAA
GCAGTGATCA ACCACTTTGT CGACGGCGAC CACGACATTG ACTGTAAAGT CGATGGCAAC
GGCCAAATGA TGCTGAAATC GAAGTTTGTT AAAAAACAAA GCTAA
|
|---|
| Protein sequence | MSDVIPPCPK CESPYAYSDG TLLICPECAN EWNPNEEVVD PDAIILKDAN GNLLAEGDKV
TLIKDLKVKG SSLVLKVGTK AVINHFVDGD HDIDCKVDGN GQMMLKSKFV KKQS
|
|---|
| |