Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1089 |
Symbol | |
ID | 4277623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1287546 |
End bp | 1288589 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638133863 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_749780 |
Protein GI | 114562267 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAA GTTTATTTAC ACCATACAAA CTCAATGACA CCCTAACATT ATCAAACAAG ATTTTAATGG CACCATTAAC GCGTTGTATG GCGGATGATG ATCTTGTTCC TACTCAAGCT ATTGCAGACT ATTATGCTCG CCGTGCTGAA GCGGGTTTGA TTATCAGTGA AGCGACAATT ATCCGTCCAG ATGCACAAGG TTACCCAAAT ACCCCTGGTT TATTTACTCC AGCTCAAATT GACGGCTGGC GCGTAGTGAC CGATGCGGTG CACAAAAATG ACGGCAAAAT TTTTGCTCAG CTTTGGCACA CTGGCCGTGT AGCACATCCA CACTTTTTTG ATGGTGGCGA CGTATTATCT GCTTCTGCAC AAGCTGTTGA AGGTACTGTG CCTAGAATGC GCGAATTAGT TTACCAAACG CCAAAGGCTG CCACGTTAGA TGATATTAAG CAGTTAGTTG TTGATTATGC TCAAGCAGCT GCAAATGCGA TTGATGCTGG TTTTGATGGT GTCGAGATTC ATGGTGCTAA TGGTTATTTA ATTGATCAAT TCTTACATCA TGACAGTAAC CGTCGTGAGG ACGAATACGG CCAAACCCCT GAAAACATGT CACGTTTTGC TTTAGAAGTG GTTGACGCCA TTGTTGCCAG AATTGGCGCA GATCGCACCG CTATTCGCGT TTCTCCAGGA GCCTATTTCA ATATGGCTAC CGATCCACGC GACCGTGACG TGTTTGACTA CTTGTTACCT GAGTTAGCTA AACGCAATTT AGCATTTTTA CATGGCGGTA TTTTTGACGA TTCAATGCAG TTTGATTACT TAGGTGGCAG CATATCGACC TACCTACGCA GTGTTTACAC TGGCACCTTA GTGGGTGTAG GTAGCTACAC CGCCGAAACG GGTAGTGCAG CCATTACCGA CAACAAGTTT GATTTGTTGG CTATTGGCCG TCCATTTATT GCTAATCCAG ATTATGTGGC AAAAGTACGT GATGGCGGCG AATTAGTGGC ATACGCCGAT ACCATGTTAA CGGAATTGAT TTAA
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Protein sequence | MTASLFTPYK LNDTLTLSNK ILMAPLTRCM ADDDLVPTQA IADYYARRAE AGLIISEATI IRPDAQGYPN TPGLFTPAQI DGWRVVTDAV HKNDGKIFAQ LWHTGRVAHP HFFDGGDVLS ASAQAVEGTV PRMRELVYQT PKAATLDDIK QLVVDYAQAA ANAIDAGFDG VEIHGANGYL IDQFLHHDSN RREDEYGQTP ENMSRFALEV VDAIVARIGA DRTAIRVSPG AYFNMATDPR DRDVFDYLLP ELAKRNLAFL HGGIFDDSMQ FDYLGGSIST YLRSVYTGTL VGVGSYTAET GSAAITDNKF DLLAIGRPFI ANPDYVAKVR DGGELVAYAD TMLTELI
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