Gene Sfri_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1089 
Symbol 
ID4277623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1287546 
End bp1288589 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content45% 
IMG OID638133863 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_749780 
Protein GI114562267 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAA GTTTATTTAC ACCATACAAA CTCAATGACA CCCTAACATT ATCAAACAAG 
ATTTTAATGG CACCATTAAC GCGTTGTATG GCGGATGATG ATCTTGTTCC TACTCAAGCT
ATTGCAGACT ATTATGCTCG CCGTGCTGAA GCGGGTTTGA TTATCAGTGA AGCGACAATT
ATCCGTCCAG ATGCACAAGG TTACCCAAAT ACCCCTGGTT TATTTACTCC AGCTCAAATT
GACGGCTGGC GCGTAGTGAC CGATGCGGTG CACAAAAATG ACGGCAAAAT TTTTGCTCAG
CTTTGGCACA CTGGCCGTGT AGCACATCCA CACTTTTTTG ATGGTGGCGA CGTATTATCT
GCTTCTGCAC AAGCTGTTGA AGGTACTGTG CCTAGAATGC GCGAATTAGT TTACCAAACG
CCAAAGGCTG CCACGTTAGA TGATATTAAG CAGTTAGTTG TTGATTATGC TCAAGCAGCT
GCAAATGCGA TTGATGCTGG TTTTGATGGT GTCGAGATTC ATGGTGCTAA TGGTTATTTA
ATTGATCAAT TCTTACATCA TGACAGTAAC CGTCGTGAGG ACGAATACGG CCAAACCCCT
GAAAACATGT CACGTTTTGC TTTAGAAGTG GTTGACGCCA TTGTTGCCAG AATTGGCGCA
GATCGCACCG CTATTCGCGT TTCTCCAGGA GCCTATTTCA ATATGGCTAC CGATCCACGC
GACCGTGACG TGTTTGACTA CTTGTTACCT GAGTTAGCTA AACGCAATTT AGCATTTTTA
CATGGCGGTA TTTTTGACGA TTCAATGCAG TTTGATTACT TAGGTGGCAG CATATCGACC
TACCTACGCA GTGTTTACAC TGGCACCTTA GTGGGTGTAG GTAGCTACAC CGCCGAAACG
GGTAGTGCAG CCATTACCGA CAACAAGTTT GATTTGTTGG CTATTGGCCG TCCATTTATT
GCTAATCCAG ATTATGTGGC AAAAGTACGT GATGGCGGCG AATTAGTGGC ATACGCCGAT
ACCATGTTAA CGGAATTGAT TTAA
 
Protein sequence
MTASLFTPYK LNDTLTLSNK ILMAPLTRCM ADDDLVPTQA IADYYARRAE AGLIISEATI 
IRPDAQGYPN TPGLFTPAQI DGWRVVTDAV HKNDGKIFAQ LWHTGRVAHP HFFDGGDVLS
ASAQAVEGTV PRMRELVYQT PKAATLDDIK QLVVDYAQAA ANAIDAGFDG VEIHGANGYL
IDQFLHHDSN RREDEYGQTP ENMSRFALEV VDAIVARIGA DRTAIRVSPG AYFNMATDPR
DRDVFDYLLP ELAKRNLAFL HGGIFDDSMQ FDYLGGSIST YLRSVYTGTL VGVGSYTAET
GSAAITDNKF DLLAIGRPFI ANPDYVAKVR DGGELVAYAD TMLTELI