| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1086 |
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| Symbol | |
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| ID | 4277620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1285125 |
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| End bp | 1285850 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133860 |
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| Product | hypothetical protein |
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| Protein accession | YP_749777 |
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| Protein GI | 114562264 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCAGAG CATATCAAAA TAAAAAAGAG TCCATGGCGA AAACCGCTGG CCAAAAGACA
CGAATTTACT CACGTTACGG TAAAGAGATT TATATTTGCG CTAAAGGTGG CGTCGACCCA
GATGGCAACC TAGCACTACG TAGCTTGATT GCCCGCGCGA AGAAAGATCA AGTTCCAGCA
CACGTAATTG AACGTGCCAT TGAAAAAGCT CGTGGTGGTG GTGGTGAAGA TTATGATACC
GCCCGCTATG AAGGTTTTGG TCCTGGCGGC TGTATGGTGA TTGTTGACTG CTTAACAGAC
AACGGTAATC GCACATTTAC TCAGGTTCGC CAAGCATTTG TTAAAAATGA TGCCAAGTTA
GGTAGCCCTG GTACTGTTGG CCATATGTTC GAACATCAAG CAGTTTTTGT GTTTGAAGGT
GAAGACGATG AAGCCATTCT TGAATTGCTT ATGATGGCCG ACGTCGACGT TGCCGATGTA
GAGCTAGAAG ATGGCATCAT TAGCGTATTT GCACCCGTAT CTGAGTTTAA CAATGCGCGC
ACTGTGTTAA CTGAAGCCTT TCCAGAGATA GACTTTAAGG TAGAGAATTT AGCATTTGTG
CCACAAACAA TGACTGAACT TACTGGTGAA GATATTGAAA GTTTTGAAAA GTTCTTAGCG
GCTCTTGATG ATTGTGATGA CGTTCAGAAC GTTTACCACA ATGCAGACAT TAACGACGAA
GAATAA
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| Protein sequence | MGRAYQNKKE SMAKTAGQKT RIYSRYGKEI YICAKGGVDP DGNLALRSLI ARAKKDQVPA
HVIERAIEKA RGGGGEDYDT ARYEGFGPGG CMVIVDCLTD NGNRTFTQVR QAFVKNDAKL
GSPGTVGHMF EHQAVFVFEG EDDEAILELL MMADVDVADV ELEDGIISVF APVSEFNNAR
TVLTEAFPEI DFKVENLAFV PQTMTELTGE DIESFEKFLA ALDDCDDVQN VYHNADINDE
E
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