| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1080 |
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| Symbol | |
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| ID | 4277614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1277280 |
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| End bp | 1280564 |
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| Gene Length | 3285 bp |
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| Protein Length | 1094 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133854 |
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| Product | peptidase S41 |
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| Protein accession | YP_749771 |
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| Protein GI | 114562258 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000759167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTC GTCGCTCCGT TGCGCATTGT ATGTTGGCAC TAGGCACTTT AGCGTGTTCA
TCAATGATAT TCGCCAACGC CTCAAATCAA GGTTATTACC GTGCTCCAGC CTTAAACGAT
CAAACCTTAG TGTTTACTGC CGAAGGCGAT CTTTGGACTA AGCAACTCAA TCAAACCAAA
GCCAGCCGCT TAACCAGTTT GGCCGCAGAA GAGTTAGACG CAACTATTTC TAAAGACGGT
AAATGGGTGG CATATACTGC CAATTATGAA GGCGCAACCG AAGTGTATGT GATGCCAATT
GCAGGCGGCG TAGCTAAACG TGTGAGCTTT GAAAACAGCC GAGTACGTCT GCAAGGCTGG
ACAGCGTCTG GCGAAGTATT GTATTCAACC GACAACGCCT TTGGCCCGGC TAACTTCTGG
GTGCTTAAAA CCGTTGACCC ACAATCCTTA ACCATTACCG ATTTACCGTT AGCTGACGCA
GTCGAAGGCA CCATTGATGA TAAAGGTGAA TATGTTTATT TTACCCAATT TGGTCTGCAA
GTTAGCGGCG ACAATGTCAA AGTGTATCGC GGCGGCGCCA AAGGCGAAAT TTGGCGTTAT
AAGTTAGGCA GTAAACAAGA AGCGCAGCAG TTAACCAGCG CCCATGAAGG CTCGGTTAAA
CAGCCAATGC TATGGAACCA GCGTGTTTAC TTTGTCAGTG ACCAATCAGG CAATGACAAC
ATCTGGTCAA TGACACTAGA TGGCAAAGAC ATTAAACAAC TTACTCAATA CAGCGACTGG
CAAGTGCGTG ACGCCCAGCT TAATAATGGC CGTATTATAT TTCAGCAGGG CGCCGACATT
AAGTTGCTTA ACTTAGCCGA TCTTGCAGAA TCTACAGTAG CCATCGAGCT TACCAGCGAC
TTTACTCATC GCCGTGAGCA GTGGGTTAAC GACCCAATGG ATTACGCCAC CTCGACAGTA
TTTTCTCATC AAGGCGATAA CGTAGTAATA ACGGCCCGTA GCCATGTAGC TATTGCCAGC
AACGATGGTC GTCGTTTAGT GCAAATAGAT TCACCCGCCG ATAGTCGTGT ACGCGATGCG
TTGTTAAGTG ATGACGGCAA ATGGGTTTAT GGCATTAGCG ATGCGTCTGG CGAACAAGAA
ATTTGGCAAT ATCCTGCCGA CGGTTCTGCT GGTGCTAAGC AGCTCACTAA AGATGGCAGC
ACCTTACGCA CCAGCTTGTC GTTATCTCCC AATGGCCGTT ATTTAGTGCA TGACGATTAC
ATGGGCAATG TATGGTTACT TGATTTAAGC CGCTACAATA ACCAAAAAAT CATACAAAAT
GGTGAGGGTT TAGGCCCTTA CCAAGACATA AAATGGTCTG GCGACAGTCA ATTTATTGCG
CTAACCAAGG CTGAAATTGG CAAACAACGT CCGCAAATTG TGTTGTATTC CATTAACGAA
TCAAAATCAC AAACCTTGAC CACAGACAAA TATGAGTCGT TTTCTCCTAG CTTTAGTCAC
GATGGTAAAT GGTTGTATTT CTTGTCTAAC CGCGAATTTA AAGCTAATCC TGGCTCGCCT
TGGGGCGACC GTAACATGGG ACCGATTTTT GACAAGCGCA CTCAAGTGTT TGCCTTAGCG
TTAGACGCTA AAGCGTCGTT TCCGTTTGCC AAACCAACCG AGCTTACCGT TAACAAAGAC
GCTAAAAAAG CTGACAGTAA AGACCAAGAC ATCCCAGCAA AAGTCAAAGT AGAGTGGGAC
GGATTAAACC AACGCTTATG GCAAGTGCCA GTTGATGCAG GTAACTACAA TAGCTTAACC
GCAGCTAAAG ATAAGCTGTA TTTATTGGAT GGTAGCCAAG ACAAAAGCGA GCTAAAACTG
ATTAAGTTTG ACCCGCTCAA TATTAAAGTC GACGCCTTTA GCGAAGATGT CGGCCAATAT
TCGCTATCAA AAGATGGCAG TAAAATCATG CTGCGCAAAC AATCTGATCC TAAAAGCCTC
ATGATTGTCG ATGCCGGCGA CAAACTTCCC AGCGATGTAT CGCGCGCCAA AGTCAGCACC
GACCAATGGC AATTAAGTAT TTCGCCGCAG CAAGAATGGC AACAAATTTT TGAAGACGCG
TGGTTAATGC ATCGCGACTC GTTTTTTGAT CCAAAAATGC GCGGCGTAGA TTGGCAAGCA
GCTAAAGCTA AATATCAACC TTTGGTCGAC AGACTGACCG ATCGTAATGA GCTGAATGAC
ATTTTTACCC AAATGATGGG TGAACTGAAC TCGTTACATT CACAAGTGCG TGGTGGAGAT
ATTGCCCAAG ATGCCGATGC AGCCAAAGCC GCTGCATTAG GGGCTAGGCT GACACAAACC
GATAGAGGTG TGGTAATAAG CCATATTTAT CAAACCGATC CTGAGTTACC GTTGTCGGCA
TCCCCATTGG CACGCATTGA GGTTGATGCG AAAGAAGGCG ATGTGATTGC GAGCATCAAT
GGCAAGAAAA TCACTAACAT TGCCGATGTA ACTCAACTGC TGCGAAATCA AGGCAACAAG
CAAGTGTTGC TCGGTTTAGT CCGTGGTAAA ACAGCCATCA ATACCATAGT GACTCCCCAT
GATATTGGTA CCGATGCCAA GCTGCGTTAC CTTGATTGGG TTGAGCATAA CGGCGACAAA
GTGGCCAAAG CCTCTAAAGG GAATATTGGT TATTTACACT TATATGCCAT GGGCAGCGGT
GATGTCGAAA GCTTTGCTCG CGAGTTTTAT ACTAATTACG ACAAAGAAGG TTTAATCATC
GATGTTCGCC GCAATCGTGG TGGCAATATC GACAGCTGGA TTATCGAAAA ACTGTTACGC
CGTGCGTGGG CATTTTGGCA GCCAACTCAT GGCAGCACAA ACGCAAACAT GCAACAAACC
TTCAGAGGCC ATTTAGTTGT GTTGGCTGAT CAAATGACCT ACTCAGATGG TGAGACTTTT
TCTGCTGGCA TTAGAGCGCT GAATATTGCG CCTATAATCG GTAAGCAAAC CGCGGGCGCT
GGTGTGTGGT TGTCGGGTCG AAATTCAGTG ACCGACAAAG GCATGGCACG AGTGGCAGAA
TACCCACAAT ATGCCATTGA TGGCCGTTGG GTTGTTGAAG GTCACGGGGT TGAGCCAGAC
ATTGAAGTTG ATAACTTACC TTATGCCACT TTTAGCGGTA AAGATGCACA GCTTGATGCT
GCTATCAGTT ATTTGAAAGA TGAACTAGTA CAACAACCTA TTGCTCCATT ACAAGGCTTG
CCAATGCCTG ACATTGGCCC TGCAGCCGAC ATAAAAGCGA AGTAA
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| Protein sequence | MKLRRSVAHC MLALGTLACS SMIFANASNQ GYYRAPALND QTLVFTAEGD LWTKQLNQTK
ASRLTSLAAE ELDATISKDG KWVAYTANYE GATEVYVMPI AGGVAKRVSF ENSRVRLQGW
TASGEVLYST DNAFGPANFW VLKTVDPQSL TITDLPLADA VEGTIDDKGE YVYFTQFGLQ
VSGDNVKVYR GGAKGEIWRY KLGSKQEAQQ LTSAHEGSVK QPMLWNQRVY FVSDQSGNDN
IWSMTLDGKD IKQLTQYSDW QVRDAQLNNG RIIFQQGADI KLLNLADLAE STVAIELTSD
FTHRREQWVN DPMDYATSTV FSHQGDNVVI TARSHVAIAS NDGRRLVQID SPADSRVRDA
LLSDDGKWVY GISDASGEQE IWQYPADGSA GAKQLTKDGS TLRTSLSLSP NGRYLVHDDY
MGNVWLLDLS RYNNQKIIQN GEGLGPYQDI KWSGDSQFIA LTKAEIGKQR PQIVLYSINE
SKSQTLTTDK YESFSPSFSH DGKWLYFLSN REFKANPGSP WGDRNMGPIF DKRTQVFALA
LDAKASFPFA KPTELTVNKD AKKADSKDQD IPAKVKVEWD GLNQRLWQVP VDAGNYNSLT
AAKDKLYLLD GSQDKSELKL IKFDPLNIKV DAFSEDVGQY SLSKDGSKIM LRKQSDPKSL
MIVDAGDKLP SDVSRAKVST DQWQLSISPQ QEWQQIFEDA WLMHRDSFFD PKMRGVDWQA
AKAKYQPLVD RLTDRNELND IFTQMMGELN SLHSQVRGGD IAQDADAAKA AALGARLTQT
DRGVVISHIY QTDPELPLSA SPLARIEVDA KEGDVIASIN GKKITNIADV TQLLRNQGNK
QVLLGLVRGK TAINTIVTPH DIGTDAKLRY LDWVEHNGDK VAKASKGNIG YLHLYAMGSG
DVESFAREFY TNYDKEGLII DVRRNRGGNI DSWIIEKLLR RAWAFWQPTH GSTNANMQQT
FRGHLVVLAD QMTYSDGETF SAGIRALNIA PIIGKQTAGA GVWLSGRNSV TDKGMARVAE
YPQYAIDGRW VVEGHGVEPD IEVDNLPYAT FSGKDAQLDA AISYLKDELV QQPIAPLQGL
PMPDIGPAAD IKAK
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