| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1072 |
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| Symbol | |
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| ID | 4277834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1268748 |
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| End bp | 1270367 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133846 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_749763 |
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| Protein GI | 114562250 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGTCTT TCAATGAAAA AGTCGAACAC TTAAGCGACA CTCAAGGCCG TGAGGCTTTA
TTGGGCATGT TACGTGGTAT TGAACGTGAA GCATTGCGTA TTGATGAAAA CGGCCATTTA
GCACAAGACG GACACCCAGA AGCGCTCGGT TCTGCTCTGA CCCATTCGCG CATTACCACT
GATTACAGCG AAGCCTTATT AGAATTTATT ACGCCAGTGA GTCATAGTAT TGATGATTTG
CTCGAAGGGT TAACGCAAAC CCACGCTTAC AGTGTGCGTA ACCTTAATGG TCAAAAATTG
TGGCCTGTCA GCATGCCATG TTACGTAGGT GAAGTCAGTG ATATCCCTGT AGCACGATAT
GGCAGCTCCA ATAACGGTAA AATGAAAACC TTATATCGTA AAGGGTTAAC CCATCGTTAT
GGTGCATTAA TGCAGATCAT TTCTGGGGTT CATTTTAACT TTTCGGTGTC GCAAGATTTA
TGGCAACGTT TGTATGATGA CAAGATGACC AATGGTGCCG CTTGTTGCAG TAAAAATATT
AGCTTTGAAG ACTTTATCTC AGAATCTTAT TTTGGATTGA TCCGTAACTA CCGTCGTTTA
GTGTGGGTGT TACCGTATTT GTTTGGGTCA ACGCCGGCAT TATGTAGTTC ATTTATAAAA
GATCAAGACG TCGATTTCGA ATTTAAAAAA ACCGGTAAAG GGACCTTATA CCTTCCTTAT
GCAACTTCAT TGCGCATGAG TGATTTAGGC TATACCAACA AAGAACAAGA CACGCTTAAT
ATTAGCTACA ACTCATTGCC TGACTACCTT GAAGGCGTCG GCGCAGCAAT TAAAATGCCA
TCGAAAAAGT TTGAAAAGAT TGGTATTAAT GTCGACGGTG AATTCCGCCA ACTCAATAGT
AATATTTTGC AGATTGAAAA TGAATTTTAT GCACCAATCC GTGCAAAACG TGTCACCCAA
AAGGGCGAGA AACCTTCACA AGCGTTAGCA CGTGCAGGCG TTGAGTACAT TGAAGTACGT
GCCTTAGACG TTAATCCATT TAGCCCAGTA GGGATAGATG CAACTCAAGT GCGTTTTCTT
GATCTATTTT TATTGTACTG CTTATTGTCG CCATCTGAGG ATACTGATGC CGTCGGCGAC
GCAGAGATTG CCGCTAACTT GAAAGCCGTA GTATTAGAAG GTCGTAAACC TGGACTTGAA
TTACAACGCA ACGGTAAGAC CATTAGCCTA ACGCAATGGA TGCACGAGTT ATTTGGGCAA
TTAAACACAA TCGCGAAGCT ACTCGATGGT GATGATAGCC ATGCTTACCA AACAGCCTTA
AGCACGTGGT CTGAAGCTAT CGATGATCCA GATAAAACGT TATCGGGCCG GGTGATAAAC
GAAGTTGTGG TTAAAGGTAC CGACCATAGC GTGTGGGTTA AACAACTGGC AAATGATTAT
CATGAATTTT TAAGCCATTA CCCATTAAGC GATGAAGTCG AACAAGGCTA TGAAAACGAA
GCTAAAAAGT CTTTGCTTGA GCAGCACAGT TTAGAAGCTC AACCACAAGA TAATTTTGCG
ACGTTCCTCG CTCATTATTT TAGTGATCTT GTTCCAGCAG GCACTTTCGA GGCGAAGTAA
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| Protein sequence | MKSFNEKVEH LSDTQGREAL LGMLRGIERE ALRIDENGHL AQDGHPEALG SALTHSRITT
DYSEALLEFI TPVSHSIDDL LEGLTQTHAY SVRNLNGQKL WPVSMPCYVG EVSDIPVARY
GSSNNGKMKT LYRKGLTHRY GALMQIISGV HFNFSVSQDL WQRLYDDKMT NGAACCSKNI
SFEDFISESY FGLIRNYRRL VWVLPYLFGS TPALCSSFIK DQDVDFEFKK TGKGTLYLPY
ATSLRMSDLG YTNKEQDTLN ISYNSLPDYL EGVGAAIKMP SKKFEKIGIN VDGEFRQLNS
NILQIENEFY APIRAKRVTQ KGEKPSQALA RAGVEYIEVR ALDVNPFSPV GIDATQVRFL
DLFLLYCLLS PSEDTDAVGD AEIAANLKAV VLEGRKPGLE LQRNGKTISL TQWMHELFGQ
LNTIAKLLDG DDSHAYQTAL STWSEAIDDP DKTLSGRVIN EVVVKGTDHS VWVKQLANDY
HEFLSHYPLS DEVEQGYENE AKKSLLEQHS LEAQPQDNFA TFLAHYFSDL VPAGTFEAK
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