| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1071 |
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| Symbol | |
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| ID | 4277833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1265573 |
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| End bp | 1268404 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133845 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_749762 |
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| Protein GI | 114562249 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCAG CGGCCATCAG TGCTGTATTA AGTGGTTGCG CATATGACGC ATATCAGTCG
TCGAGTTTGC CCCAAGGTGT TACCTTAATT GAAACCGCGG CCCCGACAGC AAATCAAGTT
AGCATTCCTT ATAAAAAATA TCAGTTAGCC AACGGCTTAA CCGTGATTTT GCATCAAGAT
AAGTCAGATC CATTAGCTCA TGTCGATGTG ACCTATCATG TCGGTTCAGC CCGTGAATTA
GCCGGTCGCA GTGGCTTTGC ACATTTATTT GAACATATGA TGTTCCAAGG CTCACAACAC
GTTGGTGATG AACAGCATTT TAAAGTGGTT ACTGAAGCGG GCGGAACATT AAACGGCACC
ACCAATACCG ACAGAACCAA TTATTTTGAA ACTGTGCCAA GTAATCAACT AGAGAAAATG
CTGTGGTTAG AGTCTGACCG TATGGGCTTT TTACTGCCCG CCCTCACGAG TGAAAAATTC
GAAGTACAAC GTGAAACCGT TAAAAATGAA CGTGCACAAC GGATTGATAA CCGTCCTTAT
GGCCGTTTAA ATGAACGTTT TAACCAAGCG TTTTATCCAG CGGGTCACCC GTATTCTTGG
CCTGTTATTG GCTGGCCAGA TGATTTAGAT CGCGCCACAG TTGCTGATGT GAAACATTTT
TTTCAACGTT GGTATGGGCC TAATAATGCG ACCTTAACCA TTGGTGGCGA CTTTGATGAG
ATCCAAACGT TAGCATGGGT AAATAAATAC TTTGGTGAAA TTCCAGCAGG GCCTACGGTT
AAGCCTGAAG CTAAAACCAT GGTGACATTG GATAAAACCC GTTATATATC GATGGAAGAC
AAAGTACATT TGCCATTAAT ATACATGGGA TTCCCCACTG TTTACGCGCA ACACAAAGAC
GAAGCCGCAC TCGATCTACT CGCTAATATT CTCGGTGGCG GTAAAACATC ACTTATCTAT
AAAAATTTGG TCAAAGATGG TTATGCAGTC CAAGCTGCAG TCAGCCATCC ATGCCAAGAG
CTTACTTGTC AGTTATCACT TTACGCTGTC GCTAACCCGA GTAAAGGCGG CAGTCTTGCT
GATCTTGAAA GCAAAATTAA TGAAACTATC AGTGAGTTTG AACAACGTGG CGTAACCGAC
GATGACTTGC AAAAAGTCAA AGTGCAGTTC GAAGCCAGCA CTATTTTTGG TATGCAAAGT
GTCGCTGGAA AAGTCTCGAC ACTTGCCGCT AACCAAACCT TTTTTGGTAA ACCTGACATG
GTGGCTGCTG ATTTAGCTCG TTATGCTAAC GTCACCAAAG CCGATGTAAT GCGGGTATTT
AATACCTACA TTAAAAATAA GCCAATGGTG GTAATGAGTA TTGTGCCAGA AGGGCAAACA
CAATTAATCG CCCACGCGGA TAATTTTGAA CCGACTACTT TGCCTATTGC GCAAGAAGCG
GTAACGGGAT TAACCGATAT CACTTTCGCC AAATCTTCAT TTGATCGCAA TAAAACCCCA
GCATCAGCCG CGGCGCCGAT ACTAACAGTG CCGCAATTAT GGGACAGTAA GCTGGCAAAT
GGCATTAAAG TGATGGGCAC TGAAAGTGAC GAAACGCCAA CTGTCGAACT GCTTATTTAT
TTGGATGGCG GCCATCGTTT AACCCCAATT AACAAGGCGG GTCTTGCTGA GTTAACTGCA
TCAATGCTTA ATGAGTCGAG CGAGCAACGC AGCAGCGAGG ATTTGGCTGG GGCGCTTGAT
ATGTTAGGTT CATCGATTAG TTTTGGCGCC AGCGATTCAC AAAGTTACCT TAAAGTGTCG
AGTTTAACGG CAAACCTAGA TGCCACGCTT GCCATCGTTA AAGAGCGTTT GTTTAGTCCC
GGTTTTGTTG CTGCAGATTT TGAACGAGTT AAACAACAGC AGTTGCAAGG TTTGCAACAT
CAAATGTCCG ATGCTAATTA TCTAGCCCGA AGTGGTTTTT CTGCCTTGTT ATATGGCAAC
AATAGCCCAT TAGGGATCAG CAGTGATGGT ACGATTAAAT CAATATCAGC ATTAACGCTA
GATGACGTGA AGCAATTTTA CCAACAGCAA TACCGTGCAG GTAATGCTCA GATGGTCGTG
GTGTCTGACT TAAATCAACA ACAAATAATG CCTAAGTTGT CGATGTTTAA TGAATGGCAA
GGTGAGGCGA CTCAGGTTGC AGCGCTGCCT GCATTACCAA CACACCTTAA AAACACCATT
TATTTGATTG ATAAACCCGG TGCAGCACAG TCGGTGATTA ATATCGGCCA AGTGTCGTTA
CCCTATGATG CAACAGGTGA TTATTTTAAA GCTTATCTGA TGAACTACCC ATTAGGGGAT
GCGTTTAATA GTCGTATTAA TCTTAATCTA CGTGAAGATA AAGGTTACAC CTATGGTGCG
CGCACTCAGT TTGGTGGCGC TGAAGATACC GGTCAGTTTA TGGCGTATGC TAGCGTAAGA
AGCGATGTAA CAGGGTTAGC AGTAGCTGAG TTTGTTAACG AAATTAACGC TTACCAAGCA
TCTGGTATGA CTGACGAAGA AAGTGCCTTT ATGCGCAGTT CCATTGCGCA GAGCCAAGCA
TTAGAATACG AAACCCCGTA TCAAAAAGCC GGTTTTTTAA GAATGATCCA ACGTTATCAG
CTCGATAAAA GTTTTACGGC TAAACAAGAC AAAATTGTGA AAAATATTTC AACCGAAGAG
TTAAACAAAC TTGCCAGTAA ATTATTAAAT ATCAATGATA TGGTGATGCT GGTGGTGGGT
GATAAAACCA CAGTTGTACC GCAGTTAACA GCGCTGGGGT ATCAGATTGA AATGATGACA
CTTGCCGACT AG
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| Protein sequence | MLAAAISAVL SGCAYDAYQS SSLPQGVTLI ETAAPTANQV SIPYKKYQLA NGLTVILHQD
KSDPLAHVDV TYHVGSAREL AGRSGFAHLF EHMMFQGSQH VGDEQHFKVV TEAGGTLNGT
TNTDRTNYFE TVPSNQLEKM LWLESDRMGF LLPALTSEKF EVQRETVKNE RAQRIDNRPY
GRLNERFNQA FYPAGHPYSW PVIGWPDDLD RATVADVKHF FQRWYGPNNA TLTIGGDFDE
IQTLAWVNKY FGEIPAGPTV KPEAKTMVTL DKTRYISMED KVHLPLIYMG FPTVYAQHKD
EAALDLLANI LGGGKTSLIY KNLVKDGYAV QAAVSHPCQE LTCQLSLYAV ANPSKGGSLA
DLESKINETI SEFEQRGVTD DDLQKVKVQF EASTIFGMQS VAGKVSTLAA NQTFFGKPDM
VAADLARYAN VTKADVMRVF NTYIKNKPMV VMSIVPEGQT QLIAHADNFE PTTLPIAQEA
VTGLTDITFA KSSFDRNKTP ASAAAPILTV PQLWDSKLAN GIKVMGTESD ETPTVELLIY
LDGGHRLTPI NKAGLAELTA SMLNESSEQR SSEDLAGALD MLGSSISFGA SDSQSYLKVS
SLTANLDATL AIVKERLFSP GFVAADFERV KQQQLQGLQH QMSDANYLAR SGFSALLYGN
NSPLGISSDG TIKSISALTL DDVKQFYQQQ YRAGNAQMVV VSDLNQQQIM PKLSMFNEWQ
GEATQVAALP ALPTHLKNTI YLIDKPGAAQ SVINIGQVSL PYDATGDYFK AYLMNYPLGD
AFNSRINLNL REDKGYTYGA RTQFGGAEDT GQFMAYASVR SDVTGLAVAE FVNEINAYQA
SGMTDEESAF MRSSIAQSQA LEYETPYQKA GFLRMIQRYQ LDKSFTAKQD KIVKNISTEE
LNKLASKLLN INDMVMLVVG DKTTVVPQLT ALGYQIEMMT LAD
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