| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1070 |
|---|
| Symbol | |
|---|
| ID | 4277832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1265066 |
|---|
| End bp | 1265494 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638133844 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_749761 |
|---|
| Protein GI | 114562248 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1238] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTT TATGGTTAAT GTTCAGCGGC GCCTTTTTGG CTGCAACACT GTTGCCTGGC
GGCTCAGAAG TGTTACTGGT GGCATTACTT AATCAAACGC CATCTTTATG GTTCGAATTA
TTGATACTGG CCACTATTGG TAATACGCTT GGTGCGATAA CCAGTTATGG TCTTGGTCGA
GCAGGGCGGT TAGCCAAAAA TCCACAAGAT ATTCAACGTC GACAATACCG CTATGCACTC
GCATGGATAG AAAAATATGG TATGTGGGCC CTATTATTAT CTTGGTTACC GATAATCGGT
GATTTGCTAT GTTTACTGGC GGGATGGTTA AAAATACCTA TCTTACCAGC CTCATTATTT
ATGTTTATGG GTAAATTATT ACGTTATAGC GTCATTGTAT TGCTGATGAC GTATACGTTT
GAGTATTGA
|
|---|
| Protein sequence | MTSLWLMFSG AFLAATLLPG GSEVLLVALL NQTPSLWFEL LILATIGNTL GAITSYGLGR
AGRLAKNPQD IQRRQYRYAL AWIEKYGMWA LLLSWLPIIG DLLCLLAGWL KIPILPASLF
MFMGKLLRYS VIVLLMTYTF EY
|
|---|
| |