Gene Sfri_1062 details

Gene Information

• Locus tag: Sfri_1062
• Symbol: recA
• ID: 4277824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1250967
• End bp: 1252031
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638133830
• Product: recombinase A
• Protein accession: YP_749753
• Protein GI: 114562240
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02012] protein RecA

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTTG ATCCAAATAA AGAGAAAGCA CTAGCCGCCG TTTTAAGCCA AATTGAAAAG 
CAATTTGGTA AAGGCTCAAT TATGAAGTTG GGCGAAGATC GCACAATGGA TGTTGAAACT 
ATCTCTACCG GTTCGCTTTC ATTGGATATC GCACTCGGTG CGGGCGGTTT GCCAATGGGA 
CGTATCGTTG AAATTTACGG TCCAGAATCA TCAGGTAAAA CGACGTTAAC TCTTGAAGTG 
ATCGCCGCAG CGCAACGCGA AGGTAAAACC TGTGCGTTTA TTGATGCAGA GCATGCTCTG 
GACCCTATTT ATGCCAAAAA GCTAGGCGTA GATATTGATA ACCTACTTTG TTCACAACCA 
GACACTGGTG AGCAAGCATT AGAAATTTGT GATGCGTTAA CTCGTTCTGG TGCTGTAGAC 
GTTATTGTGG TCGATTCTGT TGCGGCATTA ACGCCAAAAG CTGAAATTGA AGGTGAAATT 
GGTGATTCAC ATATGGGCCT CGCCGCTCGT ATGATGAGCC AAGCTATGCG TAAGCTGGCT 
GGTAATCTTA AGCAATCAAA TACTTTGCTT ATTTTTATTA ACCAAATTCG CATGAAAATT 
GGTGTGATGT TTGGTAGTCC AGAAACTACC ACCGGTGGTA ATGCACTAAA GTTCTACGCT 
TCAGTACGTT TAGATATTCG TCGTACCGGT GCCATTAAAG ACGGTGACGA AGTTGTCGGT 
AATGAAACTC GCGTCAAAGT GGTTAAAAAC AAAATTGCGG CTCCGTTTAA GCAAGCGGAA 
TTCCAAATCC TTTATGGACA AGGTATTAAC CGTACCGGTG AGTTAGTCGA TTTAGGCGTT 
GCTCATAAAT TAGTTGATAA AGCGGGCGCT TGGTATAGCT ACAAAGGCGA AAAAATTGGT 
CAAGGCCGTG CTAACGCAGG TAAGTTCTTG ACTGAGAATC CAGTCATTGC TAGCGAAATT 
AATACCACTT TACGTGCTAT GTTATTGAAT GGTGGTGCTA ATTCATCAGA TTCAAAAACA 
GAAAGTGATG AGAATATTGA CCTTGAAACT GGCGAAGTGT TTTAA 

 

Protein sequence

MKVDPNKEKA LAAVLSQIEK QFGKGSIMKL GEDRTMDVET ISTGSLSLDI ALGAGGLPMG 
RIVEIYGPES SGKTTLTLEV IAAAQREGKT CAFIDAEHAL DPIYAKKLGV DIDNLLCSQP 
DTGEQALEIC DALTRSGAVD VIVVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA 
GNLKQSNTLL IFINQIRMKI GVMFGSPETT TGGNALKFYA SVRLDIRRTG AIKDGDEVVG 
NETRVKVVKN KIAAPFKQAE FQILYGQGIN RTGELVDLGV AHKLVDKAGA WYSYKGEKIG 
QGRANAGKFL TENPVIASEI NTTLRAMLLN GGANSSDSKT ESDENIDLET GEVF