| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1059 |
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| Symbol | |
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| ID | 4278224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1245732 |
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| End bp | 1246661 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133827 |
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| Product | peptidase M23B |
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| Protein accession | YP_749750 |
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| Protein GI | 114562237 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCG GTTGGCCAAA CTTTGTGGTC TTAGCAATCA TGCTCACTGG ATGCAGCTTT
CAAGCTGATC GTCCCGCACC GGTAGATAGC TTATCGTCAA AAAATCATGG TCCTCGATAT
CATAAAGGCT CGTTAAAAAA CGATAAATAT AAAGTAAAGA AAGGCGATAC ACTTTATTCA
ATAGCTTGGG GAGCTGGGCG TAATTTTGTC GAAGTTGCTC GTTTGAATCG TTTATCGGCT
CCTTATACTA TTTATCCTGG GCAAACGCTT AATTTAGCGG CTACAAATAA TAGTCAATCG
GCACCAGCTC GAACATCCCA ACCTTATGTT AATTCAGTGC AAACCCAAGC CGTCACTAAG
CCCTATATAT CGAGCTCAGA TAGTTCTAAA TTAAAAACAA TCAAACCAGC AGCCACACCA
AACCCAAGCC CAGTAGTCGT TTCGGCCAGA ACGAAAAAAG ATCTTGATCA CAAAGTGAAG
CCTGCGTATT CTGTAACAAC TACCCAACAA ACAATTAACC AAAGTGCGAG TAGTTCTGTT
GTTAATTTGC CACAGCAAGT TCAGCAATGG CTCTGGCCAG TTAGAGGTCG AATAGTTGGA
TATTTTTCGG CATCAGAACA AGGCAATCAA GGTATAAAGA TTGCTGGTAA TCGCGGCGAT
ATTATTAAAG CCGCAGCAGA TGGGAGAGTC GTGTATGCCG GCAATGCACT GCGCGGGTAC
GGCAACTTAG TTATTATCAA GCACAATGAT GATTTTTTAA GTGCTTATGC GCATGCCGAC
ACGATATTGG TTAAAGAAAA GCAATATGTG AGTGCAGGAC AAACAGTTGC AAAAATGGGC
AGTACCGGGA CACACCAAGT TATGCTTCAC TTTGAAGTAC GATTTCATGG TAAGTCTGTC
AACCCATTAC GATATCTACC TAAACAGTAA
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| Protein sequence | MNTGWPNFVV LAIMLTGCSF QADRPAPVDS LSSKNHGPRY HKGSLKNDKY KVKKGDTLYS
IAWGAGRNFV EVARLNRLSA PYTIYPGQTL NLAATNNSQS APARTSQPYV NSVQTQAVTK
PYISSSDSSK LKTIKPAATP NPSPVVVSAR TKKDLDHKVK PAYSVTTTQQ TINQSASSSV
VNLPQQVQQW LWPVRGRIVG YFSASEQGNQ GIKIAGNRGD IIKAAADGRV VYAGNALRGY
GNLVIIKHND DFLSAYAHAD TILVKEKQYV SAGQTVAKMG STGTHQVMLH FEVRFHGKSV
NPLRYLPKQ
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