| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1047 |
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| Symbol | |
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| ID | 4278212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1230476 |
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| End bp | 1233334 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133815 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_749738 |
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| Protein GI | 114562225 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.017027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTG CCAACAATAT GACCAAATAC AGCCTACGCT CTTGGGTTCT GGTACTTGCG
TTAGCGCCCA CGATTGTAGT GGGTATTCTA CTTGGAAGTT ATTTCACGAT AAACCGCTTT
TATGAATTGG AACAAACCTT AATTGAAAAA GGCAGCAACA TTGTTGAGCC ATTAGCCATT
GCCAGCGAAT TTGGCATAAT CACTCAAGAT CGTGAATCAA CTAAACTTTT ACTCGCCGCC
TCGCAAATAA ACAATGCATC CCTGATCCTA TCTATTGCTG TTTTTGATGC CGAAAACCAA
CTCTTTGTCA CTTCGCACTA CCACAAAGAT TTTGAAACTA TGCGTTACAA ACAAACGTTG
GCAAACTTAA TCGGCACAGA ACATGAAACA ATTGGCGATA CTTTGGTCAT TCGTGTGCCA
ATAATATCCC ATACAGGGTT AGAACCAAAA CATGTTGCCA GTATAAATCG CCAAAGTAAC
GGTGATATCA ATAATAATAC TTCTGTCAAT GGCGTCGTTA CGCCTATTTA CAATAATCAA
CAAGAGCGAA TTTTAGGCTA TATATCAGTA TTACTAAATA AAGAGAACGC CCTACTCGAA
CAGCATCGAG CGGCTATAGC GGCGTTTATT ATCGTATTAA TCGGGGTGCA ATTTAACCTG
TTTTTTACCT TCCGCTTAGT CAAGCACGTG AACTACCCCA TTACTGAAAT GGTGCGAGTG
GTAGCCAAAA TTCGTGAAGG TAAACTCGAT ACTCGCCTAG AAGGCAACTT GATTGGTGAA
CTGGATCTGC TTAAACGAGG GATCAACGCA ATGGCTGGCT CATTGTCTGA ATACCACGAT
GAAATGCAGC AAAATATTGA TCAAGCGACC TCGGATTTAC GTGAAACCCT CGAGCAGATT
GAAATTCAAA ACGTTGAGCT CGATATTGCC AAAAAACGCG CGCTTGAAGC GAGTCGGATT
AAATCAGAGT TCTTAGCCAA CATGTCGCAC GAGTTACGAA CGCCACTCAA TGGTGTCATC
GGATTTGCAC GACAGTTATT AAAAACACCA CTGCATACTA GCCAGCTCGA CTACATAAAA
ACCATTGAAC GCAGTGCCAG TAACCTACTG GGTATTATTA ACGATATTCT CGACTTCTCT
AAACTGGAAG CCGGTAAAAT GATATTAGAA AAAATGCCTT TTGCACTGCG AGAAACGCTA
ACTGAAACCC TGACTATAAT TGCCGGTAGT GCACAAGAGA AAGGACTAGA ACTGGTTATC
GACATTGATG CTAATGTGCC AGAAAGTGTC AGTGGCGACG CGATGAGAGT CAGCCAGATT
ATTACTAACT TAGTCGGTAA CGCTATCAAA TTTACCGACA AAGGCAGTGT CATACTCAAA
ATACACTTAG TGGGTCAGGA CGAAGATAAC ATTACCCTGC GCTGCGAAGT TATTGACACC
GGTATTGGTA TTGATGAGAG TCAGCAAGAA TATTTATTCC AAGCATTTGG TCAAGCCGAC
TCATCCATTT CACGCCGTTT TGGTGGCACA GGATTGGGCT TAGTGATTAC TAAACGCTTA
ATCAACCAAA TGGGTGGCCA GATAGGCTTC ACCTCTGCCC CTAATAAAGG CTCAAATTTC
TGGTTTATTC TGCCGCTTGG GATCAGTCAA TTTGAAATTG GCGAAGTGTT GCCGGTTGAT
GCGTTGCAGC ACAAATCAGT CTTATTGTAT GAACCACGGG AATTAACCCG CGATACATTA
AATCGCCGCT TGGTGTCATG GCAATTAATT ATCACTAATG TTGCTAATCC AGAAAATCTC
ACCTCAGTGT TACAAACTAA AAACAGCAAA TTTGATTACA TCATCATGAG CTGCCATGGT
TTTGCCGACA ATGCGTCTTT TATCCATTTA TTACAACAAG CCAAACAACA TACCGACTGC
CTGATTTTGT TGCATGACTG TCTAGACCAA GACATGATAA TCAATGTGCT AAAAGTCAAC
GCAGATGTGT TGCTCAGCAC CCCGGTGAGC GATTTTACCC TAGCGCATCA TTTAATATAT
CCGCCAGTAC CTTCTACTTT TGTGAGTTTA CCTGAGCAGA TAAATCTCGA TGTAACCCAA
CGCCTCAATG CATCAGTATT GGCCGTTGAC GACAACATGG CCAATCTAAA GTTAATTGAT
ACTTTGCTCA AAGAATTAGT CGACAATGTG GTGACCGTTA ACAATGGCGC GGATGCGATT
CAACAAGCTA AAAAACAACC ATTTGATTTA ATCTTCATGG ATATTCAAAT GCCAGGAACC
GACGGCATAA CCGCAACCCA GCAAATACGT TCAGAATCAC TAAACCGTAA TACGCCGATT
ATTGCAGTAA CGGCACATGC TATAGCCGAA GAGCGTGAGA ATATTTTGGC TAGCGGTATG
GATGGTTTCT CGCCTAAACC GATTGATGAA TTATCACTAA AAAGCGTCAT CAGCCGCTGG
ATAATTAAAC CCCAATTTAC CCATTTTGAT ACTCATGTTC TCAATTGGGA TTTATGCTTA
ACCCAAGCAA ACCAGAAAAC CGATTTAGCC TTAGACATGT TAAAGATGTT GGTTAATTCA
TTACCTGAAA CAACCGCTAC TATTGATGAG GCATTAATAG CCAGAGATGC ACAGACACTA
TTGCAGGCAG TGCATAAACT GCATGGCGCA ACATGTTATT GCGGCGTACC GACCACACAA
AAGCTCTGTC GGGATATTGA GTCAGCACTA AAGCATAAAA TTGACATCGA TGACCTAGAA
CCTGAAATAC TAGAGTTACT TGATGAGTTA ACTAAGGTAG AATCAGCTGC AAATCAAGTG
ATAAACCAGC TATCAGTGGA TGTTCCCCAT GACCAGTAA
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| Protein sequence | MKSANNMTKY SLRSWVLVLA LAPTIVVGIL LGSYFTINRF YELEQTLIEK GSNIVEPLAI
ASEFGIITQD RESTKLLLAA SQINNASLIL SIAVFDAENQ LFVTSHYHKD FETMRYKQTL
ANLIGTEHET IGDTLVIRVP IISHTGLEPK HVASINRQSN GDINNNTSVN GVVTPIYNNQ
QERILGYISV LLNKENALLE QHRAAIAAFI IVLIGVQFNL FFTFRLVKHV NYPITEMVRV
VAKIREGKLD TRLEGNLIGE LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI
EIQNVELDIA KKRALEASRI KSEFLANMSH ELRTPLNGVI GFARQLLKTP LHTSQLDYIK
TIERSASNLL GIINDILDFS KLEAGKMILE KMPFALRETL TETLTIIAGS AQEKGLELVI
DIDANVPESV SGDAMRVSQI ITNLVGNAIK FTDKGSVILK IHLVGQDEDN ITLRCEVIDT
GIGIDESQQE YLFQAFGQAD SSISRRFGGT GLGLVITKRL INQMGGQIGF TSAPNKGSNF
WFILPLGISQ FEIGEVLPVD ALQHKSVLLY EPRELTRDTL NRRLVSWQLI ITNVANPENL
TSVLQTKNSK FDYIIMSCHG FADNASFIHL LQQAKQHTDC LILLHDCLDQ DMIINVLKVN
ADVLLSTPVS DFTLAHHLIY PPVPSTFVSL PEQINLDVTQ RLNASVLAVD DNMANLKLID
TLLKELVDNV VTVNNGADAI QQAKKQPFDL IFMDIQMPGT DGITATQQIR SESLNRNTPI
IAVTAHAIAE ERENILASGM DGFSPKPIDE LSLKSVISRW IIKPQFTHFD THVLNWDLCL
TQANQKTDLA LDMLKMLVNS LPETTATIDE ALIARDAQTL LQAVHKLHGA TCYCGVPTTQ
KLCRDIESAL KHKIDIDDLE PEILELLDEL TKVESAANQV INQLSVDVPH DQ
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