Gene Sfri_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1046 
Symbol 
ID4278211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1229890 
End bp1230495 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content40% 
IMG OID638133814 
Producthypothetical protein 
Protein accessionYP_749737 
Protein GI114562224 
COG category[S] Function unknown 
COG ID[COG3068] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCCCA TGACCAGTAA AACCGGTTTT TTTAAACGCC TAAAGGCATT GTCGTTACCT 
CAGAAGCAGC TTTTTGCACT CGCACTGTGT CAAAGAATGC TCCCAAATTA TCAATTATTT 
TCTGAAGTAT GTGAATTTGG TCAACCGCAG GTATTAGGTA CTGCACTAGA GTTATTATGG 
CAAAGCCAAT ATGACAAAAA GCTTAAGTTC AATATTGATG TGCATTTACA GCGCCTCGAT 
GAAAACACCC CTGATCCTAG CGACTTTGAA GCCTATGGTG CTTATCCCGC CATGGATGCG 
GCTGTTGCCA TCGTCACCTT AATGGGTGCG ATAGATGGAA AAATTGAAGA AGATATTACT 
AACATCAGTA AGTTATCATC AAGCACCGTC GCCAATTATA TTGAAGCTAT TAGTGATGAA 
TCATTAATGG ATGAAGAACT CGATGAGTTT GTTTTTTCGC ATCCAGTAAT GGAACAAGAA 
AAAGAATTAC AAGGCATGTT ACTCGACATT ATCGAAGCCA ATCCAGACAT AACCAGCGAA 
CTGGTTAAAG GTTTGCGTAA AGATATTATC GAAGCTGGTG TGTCTAATAT TGGTATTAGC 
CTGTAG
 
Protein sequence
MFPMTSKTGF FKRLKALSLP QKQLFALALC QRMLPNYQLF SEVCEFGQPQ VLGTALELLW 
QSQYDKKLKF NIDVHLQRLD ENTPDPSDFE AYGAYPAMDA AVAIVTLMGA IDGKIEEDIT 
NISKLSSSTV ANYIEAISDE SLMDEELDEF VFSHPVMEQE KELQGMLLDI IEANPDITSE 
LVKGLRKDII EAGVSNIGIS L