| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1044 |
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| Symbol | |
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| ID | 4278209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1228548 |
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| End bp | 1229516 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133812 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_749735 |
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| Protein GI | 114562222 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGTA TTCTTACCCC GCTAATCGCT GTATTTATTA TTATGCTGCT CGGCAGTATT
GTTCAAAAAA TGCGACTGTT GCCAGCAGAC ACCGATTTGA TCCTCAATCA GTTTGTCTAT
TACATTGCTT TCCCCGCAAT ATTATTGATT GTGCTAGCTG AAACGCGCAT TGAAGACATT
ATTCAATGGG GCTTTATCGG TGGGTTTAGC CTAGCGATGG TCATTACTTA CGCCTTAGTG
ATTGTTGTAT CACTACTTAG CACACCTAAG AAGCAAGCCG TTGCGGCAAT GCGCGCATTA
AACGCTACCT TTGGTAATAC CGCATTTATT GGTATTCCAT TGCTGAGTTT ATTATTCCCA
GGTCATAAAA TGGCATTAGT CGCTGCAGCG ATTGCCAGCT TGTTGTCAGT GATCATGTTT
GCTTTTGCTT TAGTATCAAT TGAGCTAGCC AGTCGTGATA AACAATCAAC CGACCATGCC
ATCGTCATCA TGGCTAATGC CCTGTATAAA AACCCAATCG TGGTTGGTAG TGTTATTGGC
ATTGGTTTAT CAGCACTGCA TATTACCTTA CCGGATAGTC TGGGGTTAAT GTTACACCAG
GTGGGAAATA CCTCTAGCCC ATGTGCACTG TTTGCCATAG GAATGGTACT TGCCAAAGCC
TTACGACATC AATCTGACAC AAAGATGTTC AGTATTGGTT TGATTGCGGA ACTGAATTTA
ATCAATTTAC TCAAGTTAAT TATTCAACCA TTAATCGCCT TTGGATTACT CAAACTGTTC
GGCGTAGAAA AGGAATTACT GACCATGGGA GTTATTTTAG CAGCGTTACC AACGGCAGCA
AGTGTGTATC TTTTGGCCGA CCGCTACCAA ATAAACGCCA ACGTCAGCGC CCAAGGCATT
TTATATGGTA CATTAATCAC TTTTATCAGT TTGCCAATAA TAGAAACACT TTTAAAATCC
ATTGCTTAA
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| Protein sequence | MSSILTPLIA VFIIMLLGSI VQKMRLLPAD TDLILNQFVY YIAFPAILLI VLAETRIEDI
IQWGFIGGFS LAMVITYALV IVVSLLSTPK KQAVAAMRAL NATFGNTAFI GIPLLSLLFP
GHKMALVAAA IASLLSVIMF AFALVSIELA SRDKQSTDHA IVIMANALYK NPIVVGSVIG
IGLSALHITL PDSLGLMLHQ VGNTSSPCAL FAIGMVLAKA LRHQSDTKMF SIGLIAELNL
INLLKLIIQP LIAFGLLKLF GVEKELLTMG VILAALPTAA SVYLLADRYQ INANVSAQGI
LYGTLITFIS LPIIETLLKS IA
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