Gene Sfri_1041 details

Gene Information

• Locus tag: Sfri_1041
• ID: 4277855
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1224924
• End bp: 1225415
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638133809
• Product: phosphatidylglycerophosphatase
• Protein accession: YP_749732
• Protein GI: 114562219
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1267] Phosphatidylglycerophosphatase A and related proteins

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00761456
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACTAT TAACCCAAGA TAAATTCGTA AAAAAACTGT CTTTAGCCAA TCCAATTCAC 
TTTTTGGCAT TAGGCTTTGG CAGCGGTAAA GCGGCAAAAG CACCAGGTAC TTTTGGTACT 
TTAGCCGCTG TTCCCATCGT GCTACTCATG CAACAGTTAA GCTTAACTAA TTACCTTATC 
ATTACCTGTA TTAGCATGCT CGCTGGATTC TATATTTGTG GCAAAGCAGC TAAAGATATG 
GGCGTACATG ACCATGGTGC AATTGTATGG GACGAAGTAG TTGGCTTGAT GATCACCATG 
ATTGCAGCGC CTTTAGGTTT TATGTGGTTA GCACTTGGTT TTGTACTATT TCGCTTTTTT 
GATATCGTAA AACCATGGCC TATTCGCTGG CTCGATGCCA AAGTGCATGG CGGTTTTGGG 
ATAATGATTG ATGATGTATT GGCGGGAATA TTTTCGTTAA TCGGTGTACA ACTAGCGGTC 
TATTATCTAT AA 

 

Protein sequence

MRLLTQDKFV KKLSLANPIH FLALGFGSGK AAKAPGTFGT LAAVPIVLLM QQLSLTNYLI 
ITCISMLAGF YICGKAAKDM GVHDHGAIVW DEVVGLMITM IAAPLGFMWL ALGFVLFRFF 
DIVKPWPIRW LDAKVHGGFG IMIDDVLAGI FSLIGVQLAV YYL