| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1039 |
|---|
| Symbol | nusB |
|---|
| ID | 4277853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1223465 |
|---|
| End bp | 1223869 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638133807 |
|---|
| Product | transcription antitermination protein NusB |
|---|
| Protein accession | YP_749730 |
|---|
| Protein GI | 114562217 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0781] Transcription termination factor |
|---|
| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000044365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTT CAGAGCGCCG TAAGGCCCGC CGTTTAGCCG TTCAAGCCAT TTATTCATGG
CAGTTAAGTC AAAACAAAGT TGCTGACGTA GAACATGAGT TTTTAACTGA ACAGAACACT
GACGGTGTTG ATGTCGCTTA TTTTCGTGAG TTGTTAACTG GTGTAGCATC AAAAACATCG
CAAATTGATG AGCTGTTAAA GCCGCATCTT GATCGTAAGT TTGAAGAAGT ATCACCAGTA
GAAAAAGCCA TTGTGCGTCT GGCAACTTAT GAGTTGACCT TCCGTAAAGA TGTGCCGTTT
AAAGTGGCGA TTAACGAAGG TATCGAGTTA GCGAAAGCGT TTGGTGCTGA AGATAGTCAC
AAATTTGTCA ACGGCTTGCT TGATAAGTTA GTGAAGCATA AGTAA
|
|---|
| Protein sequence | MKPSERRKAR RLAVQAIYSW QLSQNKVADV EHEFLTEQNT DGVDVAYFRE LLTGVASKTS
QIDELLKPHL DRKFEEVSPV EKAIVRLATY ELTFRKDVPF KVAINEGIEL AKAFGAEDSH
KFVNGLLDKL VKHK
|
|---|
| |