| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1032 |
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| Symbol | |
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| ID | 4277846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1215943 |
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| End bp | 1217610 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133800 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_749723 |
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| Protein GI | 114562210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.144291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAAT TTGTATACAG CATGCTTCGT GTGGGTAAAA TTGTCCCACC TAAAAAGCAA
ATATTAAAAG ACATTTCATT AAGCTTCTTT CCTGGCGCCA AAATTGGTGT ACTCGGGTTA
AACGGTTCAG GTAAATCAAC ATTGCTGCGC ATCATGGCGG GAATAGATAC CGAAATTGAA
GGTGAAGCAC GCCCAATGCC TGGGTTAAAA ATTGGCTACC TACCGCAGGA ACCGCGCTTA
AACGAACAAC AAACTGTGCG CGAAGCCGTT GAAGAAGCCC TAAGCGAAGC TAAAAATGCA
CTAATACGCT TAGACGAGGT CTATTCTGCT TATGCTGAGC CCGATGCAGA CTTCGACGCA
CTTGCAAAAG AGCAAGGCGA ATTAGAAGCC ATCATCCAAT CTCAAGATGC ACATAATCTT
GATCATATTC TTGAACGTGC TGCTAACGCA TTACGTCTCC CCGATTGGGA TGAGAAAATT
GCCGTACTCT CTGGTGGTGA ACGTCGCCGA GTGGCCATTT GTCGTTTATT GCTTGAAAAA
CCAGAAATGC TATTACTCGA CGAACCAACC AACCATTTGG ATGCCGAGTC AGTGGCATGG
TTAGAGCACT TTTTACAAGA ATATAACGGC ACTGTGGTCG CTATTACCCA CGACCGTTAT
TTCTTAGATA ATGCAGCAGG TTGGATTTTA GAACTCGACC GCGGCGAAGG TATTCCGTGG
GAAGGTAACT ACTCATCTTG GCTTGAACAA AAAGATGCGC GTTTGTCCCA AGAATCGTCC
ACAGAAAGCG CACGCCAGAA AACCATTGCT AAAGAATTAG AGTGGGTACG CCAAGGTGCT
AAAGGTCGTC AATCAAAAGG TAAAGCCCGT ATGGCTCGCT TTGAAGAATT GAACACCAAC
GATTACCAAA AGCGTAACGA GACCAATGAA CTGTTTATCC CACCAGGACC TCGCTTAGGC
GACAAAGTCA TTGAAGTAAC TAATTTAACC AAGTCATATG GTGACCGCGT ACTGATTGAT
GATTTGACAT TCACGGTTCC TAAGGGCGCT ATCGTCGGTA TTATTGGTGC TAACGGTGCG
GGTAAATCAA CCTTATTCAA AATGATCTCA GGCGAAGAAC AACCAGACAG TGGCTCTATT
TCTGTCGGTG ATTCGGTTCA AATTGCCTCG GTTGATCAGT TCCGTGATTC GATGAATGAC
AAAAATACCG TGTGGCAAGA GATTTCTGGC GGCCAAGATA TTATGCGCAT CAACAACACT
GAAATTTCTA GCCGTGCTTA CGTAGGCCGC TTTAACTTCC GTGGTGGCGA TCAGCAGAAA
ATAATTGGTT CATTATCGGG TGGTGAGCGC AACCGAGTTC ACTTAGCTAA GCTATTACAA
GCTGGTGGCA ACGTATTGTT ACTCGACGAA CCCACCAACG ACTTGGATGT TGAAACATTA
CGAGCACTAG AAGAAGCGTT ATTAGAGTTC CCTGGTTGTG CAATGGTTAT TTCCCATGAC
CGTTGGTTCC TTGACCGTAT TGCGACCCAT ATATTGGATT ACCGTGATGA AGGTAAAGTG
AGTTTCTATG AAGGTAACTA CACTGAGTAT TCAACTTGGT TAAAGGCCAC CTTAGGCACC
GATGTAGTGG AACCGCATCG ATTAAAATAC AAGCGCTTAA ATAAGTAA
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| Protein sequence | MAQFVYSMLR VGKIVPPKKQ ILKDISLSFF PGAKIGVLGL NGSGKSTLLR IMAGIDTEIE
GEARPMPGLK IGYLPQEPRL NEQQTVREAV EEALSEAKNA LIRLDEVYSA YAEPDADFDA
LAKEQGELEA IIQSQDAHNL DHILERAANA LRLPDWDEKI AVLSGGERRR VAICRLLLEK
PEMLLLDEPT NHLDAESVAW LEHFLQEYNG TVVAITHDRY FLDNAAGWIL ELDRGEGIPW
EGNYSSWLEQ KDARLSQESS TESARQKTIA KELEWVRQGA KGRQSKGKAR MARFEELNTN
DYQKRNETNE LFIPPGPRLG DKVIEVTNLT KSYGDRVLID DLTFTVPKGA IVGIIGANGA
GKSTLFKMIS GEEQPDSGSI SVGDSVQIAS VDQFRDSMND KNTVWQEISG GQDIMRINNT
EISSRAYVGR FNFRGGDQQK IIGSLSGGER NRVHLAKLLQ AGGNVLLLDE PTNDLDVETL
RALEEALLEF PGCAMVISHD RWFLDRIATH ILDYRDEGKV SFYEGNYTEY STWLKATLGT
DVVEPHRLKY KRLNK
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