| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1022 |
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| Symbol | |
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| ID | 4277137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1199341 |
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| End bp | 1200705 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133790 |
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| Product | peptidase U32 |
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| Protein accession | YP_749713 |
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| Protein GI | 114562200 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAC CTGAATTATT ATCTCCCGCT GGTACGCTTA AAAATATGCG TTACGCCTTT
GCTTATGGTG CTGATGCCGT TTACGCAGGC CAACCTCGTT ATAGCTTACG AGTTAGAAAT
AATGATTTCA AAATGGAGAC TCTTGCCAGC GGTATTGAAG AGGCTCACGC CCTAGGTAAG
AAATTGTATG TTGTCAGTAA TATTGCCCCA CATAATGCCA AGCTAAAAAC CTATATTAAA
GACATGGAAC CGGTGATTGC GATGAAACCC GATGCGGTGA TCATGTCAGA TCCTGGGCTT
ATTATGATGG TACGCGAAAC ATTTCCAGAT CAAGTCGTTC ACTTATCGGT TCAAGCGAAT
GCGATTAACT GGGCATCGGT TAAATTCTGG CAACAACAAG GCATCAAGCG AGTCATTTTA
TCCCGTGAAT TATCATTGGA TGAAATTGAA GAAATTCGCC AACGTTGCCC CGATATTGAA
TTAGAAGTGT TTGTTCATGG CGCACTTTGC ATGGCTTATT CTGGCCGTTG TTTACTCTCT
GGTTACATGA ATAAACGTGA TCCCAACCAA GGGACTTGTA CCAATGCATG TCGGTGGAAA
TACGACGTAC ATCAAGCAGA GCAAACCGAT ACAGGCGATA TCATCCCTGT AGCCCCAACC
GTTCAATTTG AAAACCCAAC ACTGGGTTCT GGCCAACCCA GTAGCGACAT AGTGCTACTG
CAAGAAGCTG GTCGCCCTGG CGAATACATG CCTGCTTTTG AAGACGAACA TGGCACTTAT
ATTATGAATT CAAAAGATTT GCGCGCTATT CAACATGTGG ATCGCTTGAC CCAAATGGGC
GTTGATTCAT TAAAAATTGA AGGTCGCACC AAGTCTTTTT ACTATGTCGC GCGCACGGCA
CAATTATATC GCCAAGCCAT TGAAGATGCC GCTGCTGGCA AAGACTTTGA TCGCACATTG
ATGAGTAATC TTCAAGGGCT TGCGCATCGC GGTTATACCG AAGGATTTTT GCGTCGTCAC
GTGCATGACG AATATCAAAA CTATCAATAT GGCCACTCGG TAAGTGATAG CCAGCAATTT
GTTGGTGAGT TTACCGGTAA ACGCAATACT GAGGGTTTGG CTGAAATTGA TGTTAAAAAT
AAATTTTCAG TTGGCGACAG TGTTGAAATA ATGACAACTG AAGGTAATTT TGTTATCACT
ATTGAATCGT TAATTAATCG CAAAGGCGAA TCGATTGACT CAGCTTTAGG CTCAGGCCAT
TTTGTGTTTC TAGCGCTTCC GGCAGATATT AATATCGACA AAGCCATGTT AATGCGTAAT
TTACCTGAGG GAATGGATAC ACGAAACCCT CATCAACCAG CTTAA
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| Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NDFKMETLAS GIEEAHALGK
KLYVVSNIAP HNAKLKTYIK DMEPVIAMKP DAVIMSDPGL IMMVRETFPD QVVHLSVQAN
AINWASVKFW QQQGIKRVIL SRELSLDEIE EIRQRCPDIE LEVFVHGALC MAYSGRCLLS
GYMNKRDPNQ GTCTNACRWK YDVHQAEQTD TGDIIPVAPT VQFENPTLGS GQPSSDIVLL
QEAGRPGEYM PAFEDEHGTY IMNSKDLRAI QHVDRLTQMG VDSLKIEGRT KSFYYVARTA
QLYRQAIEDA AAGKDFDRTL MSNLQGLAHR GYTEGFLRRH VHDEYQNYQY GHSVSDSQQF
VGEFTGKRNT EGLAEIDVKN KFSVGDSVEI MTTEGNFVIT IESLINRKGE SIDSALGSGH
FVFLALPADI NIDKAMLMRN LPEGMDTRNP HQPA
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