Gene Sfri_1015 details

Gene Information

• Locus tag: Sfri_1015
• ID: 4277130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1188801
• End bp: 1189298
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638133783
• Product: hypothetical protein
• Protein accession: YP_749706
• Protein GI: 114562193
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3154] Putative lipid carrier protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAAG CATTTACACA ACAATTATCG GCGCACTTGT TACATTTTGC GCCTCAAGTA 
AGCCGTCGCT CGCTAAACTT GATGCCGGAA GCGTTAAAAA TAATCGTCAT CAATAAACTG 
CTTAATTTAG TGTTAGCGGA ACAATTGAAG GCAGATGAAC TCCATTTTCT CAAACAAAAG 
TGGGTAGGCA TTTGTGTTGA TGATATTGGT TTGCGTTTTG AGGTGGGTGT CGAACAACAA 
CTACGAGTGC GTGCTTTTAC TCAGCCTGAT GTGACATTAA GTGCCAATGT GCCTGAGCTA 
ATTTTGGTTG CAGCAGGTAA AGAAGATCCC GACACGCTGT TTTTTCAGCG TAAATTACGT 
ATAGAAGGGG ATACAGAGTT GGGGTTAGAG GTTAAAAATT TATTGTTGTC TATAGAGTTA 
GATAGCTTAC CCAAACCCGC TCGGATCGGC ATTGAGCAAC TGGCAAAAGT ATTACAAACA 
TTAACAGCCA GTGAATAA 

 

Protein sequence

MAQAFTQQLS AHLLHFAPQV SRRSLNLMPE ALKIIVINKL LNLVLAEQLK ADELHFLKQK 
WVGICVDDIG LRFEVGVEQQ LRVRAFTQPD VTLSANVPEL ILVAAGKEDP DTLFFQRKLR 
IEGDTELGLE VKNLLLSIEL DSLPKPARIG IEQLAKVLQT LTASE