| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1014 |
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| Symbol | |
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| ID | 4277129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1187659 |
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| End bp | 1188660 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133782 |
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| Product | peptidase U32 |
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| Protein accession | YP_749705 |
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| Protein GI | 114562192 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCT TATGCCCTGC AGGTAACTTA GCGTCACTCA AAGCCGCTCT TAACGCTGGC
GCTGATGCGG TTTACCTCGG ACTAAAAGAT GACACTAATG CGCGCTCGTT TGCAGGACTA
AACTTTTCTG CAGTACAACT AGCACAAGCG ACAAAACTGG CCCAAAGCCA AGGGCGAAAG
GTATTTTTAA CCTTAAACAC TTTTCCCAAA CCCGGTGAAG AACACCGCTG GTATCAGGCC
GTTGATTTAG CCGCACAATT AGAAATGGAT GCCCTCATCG TAGCTGATTT ATCATTACTC
GATTATGCCC ACCAGCATTA TCCGCACCTT CCGTTGCATT TATCAGTACA AGCCAGCGCC
ACAAACTTAG GGGCTCTATC ATTTTATCAA CAAGCTTTTA ATATCGAACG AGCAGTATTG
CCACGAGTAT TGTCCATTAA ACAGGTTCGA GACTTAGCTA AAGTGAGCCC TGTTGAGCTT
GAAGTATTTG CTTTTGGTAG TTTATGTATC ATGGCTGAAG GACGTTGCCA TTTATCATCA
TATGTAACAG GACAATCCCC TAATACAGGC GGTTCGTGCT CACCGGCTAA CCATGTGCGT
TGGCAAGATT CTGGCAGCGA TAAATTGACC CGACTCAATA ATGTATTAAT TGATAAAGCT
GAAGCTAACC AACAACTGGG TTATCCGGTG GTCTGTAAAG GCCGTTATGT TGCCGAATAC
GATCATGATG CAAAGTATTT ATTGGAGTCA CCTACCAGTT TAAACACCTT AAGCTTGTTA
CCCGAGCTCG CCCAAGCGGG AATTAAATCA CTTAAAATAG AAGGACGTCA GCGAAGCCCT
GCTTACGTCA GCCAAGTCAC CCACGTTTGG CGTAGCGCTA TCGACACTTA TTTAGCCAGC
CCCGAGTCTT TTTGCGAGCA ACCGCAATGG TCGCAAGCGT TAGCAAAAGT ATCCGAAGGA
CAAATAACTA CATTGGGCGC TTATGAGCGT CAATGGCAAT AA
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| Protein sequence | MELLCPAGNL ASLKAALNAG ADAVYLGLKD DTNARSFAGL NFSAVQLAQA TKLAQSQGRK
VFLTLNTFPK PGEEHRWYQA VDLAAQLEMD ALIVADLSLL DYAHQHYPHL PLHLSVQASA
TNLGALSFYQ QAFNIERAVL PRVLSIKQVR DLAKVSPVEL EVFAFGSLCI MAEGRCHLSS
YVTGQSPNTG GSCSPANHVR WQDSGSDKLT RLNNVLIDKA EANQQLGYPV VCKGRYVAEY
DHDAKYLLES PTSLNTLSLL PELAQAGIKS LKIEGRQRSP AYVSQVTHVW RSAIDTYLAS
PESFCEQPQW SQALAKVSEG QITTLGAYER QWQ
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