| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1013 |
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| Symbol | |
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| ID | 4277128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1186708 |
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| End bp | 1187649 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133781 |
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| Product | peptidase U32 |
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| Protein accession | YP_749704 |
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| Protein GI | 114562191 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAT CTCTCGCTCC AATTAGTTAC TGCTGGTCAA AATCTGACGT TGAACACTTT
TATCAGCAAG TAGCATTGAG TAACATCGAT ACCGTTTATT TAGGTGAAAC CGTATGCAGC
CGCCGCCGCG AACTGAAGTT TAACAACTAT CTAGATCTCG CCAATATGCT TAAGTCTCAT
GGCAAACACG TGGTGTTATC AACCATGGCT TTGATAGAGG CGCAATCTGA ACTTAATGAA
CTGAAACGAG CTATTGATAA TGGTGATTTC AGTATTGAAG CTAATGACAT GGCTGCGGTA
CATTATGCGC ACCAAGCGAA AGTCCCCTTT GTGTGTGGGC CAACAATCAA TAATTATAAT
CGGACCAGCC TTAATTTATT GCACCAAAAA GGGATGTATC GTTTTGTCAT GCCTTGTGAA
TTATCACAGC AGTGGTTAAA CACCGTCATC AACCAGGGTG ATAAACCCGC TTTTGAAATA
GAGGTGCTCG GTCACGGCTA TTTGCCTTTA GCACATTCTG CACGCTGTTT TACCGCAAAA
CATTACCAAT TGCCAAAAGA TAAGTGTCAA ACTATTTGCC AACGCCATAG CAAAGGCTTA
CTGGCTCAAA CTCAAGAGTC ACAACCCTTA CTCCGCTTAA ATGGCATTCA AACTCAATCT
GCGGCGCAGG TAAACCTGAT TAACCAAATT CCACAAATGA TAGACATGGG AATTGATTAT
TGGCGTATAT CACCCAATAA ATTAACCGAT GTAGCCATGG GTTCAGAACT TGCTCATGTA
TTAGCGCAAA TAACAGAGGA TCCATTTAAT AGTAAGGCGC TAATCACAAA ACAGTTTAAC
GACAATAAAC AGGCATCGAT TATCAATCAT CATTGCAATG GCTATTGGTT AGGGTTACCG
GGCATGGACT ATTCCCTTGA GCCAAATACT CCAGCGGGAT AA
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| Protein sequence | MKISLAPISY CWSKSDVEHF YQQVALSNID TVYLGETVCS RRRELKFNNY LDLANMLKSH
GKHVVLSTMA LIEAQSELNE LKRAIDNGDF SIEANDMAAV HYAHQAKVPF VCGPTINNYN
RTSLNLLHQK GMYRFVMPCE LSQQWLNTVI NQGDKPAFEI EVLGHGYLPL AHSARCFTAK
HYQLPKDKCQ TICQRHSKGL LAQTQESQPL LRLNGIQTQS AAQVNLINQI PQMIDMGIDY
WRISPNKLTD VAMGSELAHV LAQITEDPFN SKALITKQFN DNKQASIINH HCNGYWLGLP
GMDYSLEPNT PAG
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