| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1012 |
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| Symbol | |
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| ID | 4277127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1184987 |
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| End bp | 1186339 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638133780 |
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| Product | nucleoside recognition domain-containing protein |
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| Protein accession | YP_749703 |
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| Protein GI | 114562190 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACATA AAAAACATAG CATTAAAACA ATTCTCACCT TTATTATTCC GTCACTGATT
GGCTTGCTAC TGTTTATGAC GCCTATCAAT GTCGAAGGTT CGATTACCAT TCCGATTGCA
ATCATCTCAA AAGCATTGCA AAGCCAAATG GGCAGTTCGA TTCAGCTTAT TATGACCTGC
ATAGTGGTAC TAATGGCATT GGCCTCATTA CTCACTCAAC TCATTAATCC TAAATTCGTT
CGTAAAAGTA TTTTTTTACG CACACTGCTG AAAGTAAATT TATTTTGGTT AGCGGTGCGA
ATTCTAGGCG CAATCTTTAT CGTCATGGTT TATTGGCAAG TGGGACCCGA AGCGATTATT
TCATCTGCAA CCGGTGGCTT GGTTCTGAAT GATTTAGTAC CAGTACTATT TTCAGTATTT
ATTTTTGCTG GCATGTTATT ACCGTTATTG CTCAATTTTG GTTTATTAGA ATTTTTTGGC
ACGTTATTAA CCAAAGTTAT GCGTCCAATA TTCAATTTAC CTGGTCGCAG TGCTATTGAC
TGTATGGCAT CTTGGTTAGG TGATGGTAGT GTGGGCATTT TAATGACCAC CAAACAATAC
GAAACTCGTT TCTATACTGC ACGTGAAGCT GCTGTTATTG GCACAACCTT TTCTGCCGTG
TCAATAACCT TTAGCTTAGT GGTGATATCA CAAGTCAAAC TTGAGCACTT ATTTGTGCCA
TTTTATCTGA CTGTGTGTTT AGCAGGGTTT ATTGCCGCAA TCATAGTACC TAAACTACCG
CCATTATCAT GGAAGAAAGA TCTGTATATC GATGATACTC CTCGCCATGA AGATGACGAA
ACAATCCCAG CCAGTCATGG CGTATTTTCG TGGGGATTTG AACAAGCAAT GCAACGGGCA
TCTTCTGCTG GTGGCATTAA GCATGTGCTA ACTGAAGGAA TTAAAAACGT TGTCGATATG
ATATTCGGGG TGATCCCTGT TGTTATGGCT ATTGGTACCG TCGCATTAGT GTTGGCTGAA
CATACGCCTA TTTTTAATTA CTTAGGTATG CCATTTATTC CGCTATTAGA ACTGCTGCAT
ATTCCAGAAG CTACCGAAGC CTCGAAAACG ATTGTGGTGG GATTTGCCGA TATGTTTATT
CCATCGATTT TGGCCAGCTC TATAGAATCT GATTTGACCC GCTTTGTTAT TGCGGCATTA
TCAGTTACTC AGCTTATTTA TATGAGTGAA GTAGGTGCTC TTTTAATTGG TAGTAAAATC
CCGGTTAACT TTTTTGAGCT ATTCGTTATC TTCATTCTAC GAACCTTAGT GACACTGCCT
ATAATTGCAT TAATGGGTCA TTTACTCATT TAG
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| Protein sequence | MTHKKHSIKT ILTFIIPSLI GLLLFMTPIN VEGSITIPIA IISKALQSQM GSSIQLIMTC
IVVLMALASL LTQLINPKFV RKSIFLRTLL KVNLFWLAVR ILGAIFIVMV YWQVGPEAII
SSATGGLVLN DLVPVLFSVF IFAGMLLPLL LNFGLLEFFG TLLTKVMRPI FNLPGRSAID
CMASWLGDGS VGILMTTKQY ETRFYTAREA AVIGTTFSAV SITFSLVVIS QVKLEHLFVP
FYLTVCLAGF IAAIIVPKLP PLSWKKDLYI DDTPRHEDDE TIPASHGVFS WGFEQAMQRA
SSAGGIKHVL TEGIKNVVDM IFGVIPVVMA IGTVALVLAE HTPIFNYLGM PFIPLLELLH
IPEATEASKT IVVGFADMFI PSILASSIES DLTRFVIAAL SVTQLIYMSE VGALLIGSKI
PVNFFELFVI FILRTLVTLP IIALMGHLLI
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