| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1010 |
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| Symbol | |
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| ID | 4277125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1182995 |
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| End bp | 1184374 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133778 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_749701 |
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| Protein GI | 114562188 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG CTCCAAAAAT GGCATTTGTT TGTGACGATT GTGGCCTTGA TTATCCGCGT
TGGCAGGGAC AGTGTCGTTG TGGTGCGTGG AATTCTTTGG TAGAAATGAA ATTGTCAGCC
TCAAAGAGTT CAACTTCACG ATCATCTGTA TTGGGATACG CTGGTGCAGT GGGTGGTGGC
TCTAAAAAAC TCAGTGAAGT TGAGTCAGAA GATGCCGAGA AAAGGCTCAC TGAAATTGGT
GAGTTAGATA GGGTACTAAG TGGCGGTTTG ACGACAGGAT CGGTGAATAT TATTTCTGGC
GACCCAGGTG CTGGTAAAAC AACATTACTA TCCGATTTGG TCGCTCGGAT GTCACAATCT
ATGGCTTCAC TGTACTGTAC TGCCGAAGAG TCATTATCTC AGTTCAAAAA CCGTGTTAAT
CGTTTAAAGC TTAATTACAA CGAAGATAAC TTATTTTTGC TGTCTGAAAC CAGTGTAGAA
GCCATTATTG AAGAATTAGA AGCCAAGCAA ATCAAGTTTG CTGTCATCGA CTCTATTCAA
GCGGTTGTCA CCGATGCAGC CAATGGCAGT CCGGGGTCGC CTTCACAAGT TAAAACAGCG
GCTCAAGCGT TTACTCAATA TTGTAAGAAA AATAATGTCA CCATGTTCAT TATTGCTCAT
GTGAATAAAA ACAATGAAAT AGCAGGCCCG CAAACCTTGG TTCATATCGT AGATTCATTG
CTGCATATCG ACACCAACGA TGGACAGATT CGTACCTTAC GCGCTAATAA AAACCGTTTT
GGTGATGTTG ATACCGTGGG GATATTCCGC ATGAGTGAAC GCGGTATGAT CAGTGTTGAT
AACCCTAGTG AAATATTTTT GTCGGGCTCA ACCACTGAAT CGCCAGGCTC AACCATCACT
TGTATTCGTA AAGGTAACCG TAATTTACTG TTGGAAATAC AATGTTTAAC CACCGAGACT
GAATCTGAGT TTCCACAACG TGTGTGTGTG GGATTAAACA TGAATCGGAT TAAAATGCTA
ACCGGTATTT TACGTAAACA TACTAAAACC AAAATTTTTC ATGATACGTT TTTTAATATA
GTGGGTGGTT TAAAAATTGA TGAGTCGGAA ACCTGCATCG ATCTAGCGCT AGTTACGGCA
TTACTGAGCA GTTTAAATGA CTTTGTCGTG CCTAGAACCA CTTGTATTAT GGGGGAGTTG
AGTTTGAATG GCGATGTGCG CCCAATTGAT AGTGGTGTGC CGAGAGTCAA AGAAGCTGCG
CAGCATGGTT TTACAGAGAT TTTTATCCCA TTCCGTAATT ATCACAAAAC CATGGAAGGG
CTAGGGGCAA AAATTATCCC AGTGAAAACT ATCCATGAGC TGCTTGAACT AATTAATTAA
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| Protein sequence | MAKAPKMAFV CDDCGLDYPR WQGQCRCGAW NSLVEMKLSA SKSSTSRSSV LGYAGAVGGG
SKKLSEVESE DAEKRLTEIG ELDRVLSGGL TTGSVNIISG DPGAGKTTLL SDLVARMSQS
MASLYCTAEE SLSQFKNRVN RLKLNYNEDN LFLLSETSVE AIIEELEAKQ IKFAVIDSIQ
AVVTDAANGS PGSPSQVKTA AQAFTQYCKK NNVTMFIIAH VNKNNEIAGP QTLVHIVDSL
LHIDTNDGQI RTLRANKNRF GDVDTVGIFR MSERGMISVD NPSEIFLSGS TTESPGSTIT
CIRKGNRNLL LEIQCLTTET ESEFPQRVCV GLNMNRIKML TGILRKHTKT KIFHDTFFNI
VGGLKIDESE TCIDLALVTA LLSSLNDFVV PRTTCIMGEL SLNGDVRPID SGVPRVKEAA
QHGFTEIFIP FRNYHKTMEG LGAKIIPVKT IHELLELIN
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