| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1008 |
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| Symbol | |
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| ID | 4277123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1179121 |
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| End bp | 1180029 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133776 |
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| Product | hypothetical protein |
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| Protein accession | YP_749699 |
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| Protein GI | 114562186 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.884011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTATAG ATATCCTCCA AAACTCACTG TTTATACCAT ACAGAGATGG CCAATTGCAT
CTGCGGCATA TTCGCCCTAC GTCGCCTATA GCACTCGGTA TTCCTATTTT GATGTTGCAT
GGTGCTATGT CCAATGGAAG AGTGTTTTAT AGCAGCTCTG GTCGTGGTTT AGGCTGTTTT
TTAGCTAACG CTGGTTTTGA TGTTTATGTG ATGGATACTG CAGGACGAGG CTTAAGTGAG
CCTAAAATAC ATCGTGACTT CACTTTGGGC CAAGGAGAAG TCATTCGTGA GCAATTGCCA
TTAGTGCAGC AGTTTATTCT ACAGCGTCAT CCATTGGTTA ATAAAGTACA TTGGTGTGCC
CATTCATGGG GCGGGGTGTT AATGGCCAGC AGTTTGGCTC GTTATAGCCA TCTACAGTCT
AGTGTGGCAT CGTTATTAAC CTTTGGTTCC AAACGTACTA TCAAAGTGAA GTCATTTAAA
AAATGGCTTA TGGTCGATTT TTTCTGGAAT CGTTTTGCGC CTTTTTATAT TGGCAGACAA
GGCTACTTTG ATGCCAGTCG ACTGCGCGTT GGTATGGATA ATGAAAGCAG TGCATCATTA
TTACAAACGA TTGATTGGGT GCGAGGTGAT TGGGTAGATC ATGATGATAA TTTTCATTAT
GCAGAAGCCG CAACCAAAGC GGTATGGCCA CCAGCATGGT TTATCGCAGG TAAAAATGAT
CATGTATTAG GCAATCCGTC AGATGTACGC GATATGATTG ATGAATGTGG TTTTAGCCAA
GTTAAGTATA CTTTGCTCGC CAAAGAAAAG GGCAATTTAT TGGATTACAA TCATGCCGGT
ATGTTGACAG CTCGACAAGC CGAGCAAGAT CACTTTGTAC AAATTAAACA ATGGTATTTA
TCAATGTGA
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| Protein sequence | MTIDILQNSL FIPYRDGQLH LRHIRPTSPI ALGIPILMLH GAMSNGRVFY SSSGRGLGCF
LANAGFDVYV MDTAGRGLSE PKIHRDFTLG QGEVIREQLP LVQQFILQRH PLVNKVHWCA
HSWGGVLMAS SLARYSHLQS SVASLLTFGS KRTIKVKSFK KWLMVDFFWN RFAPFYIGRQ
GYFDASRLRV GMDNESSASL LQTIDWVRGD WVDHDDNFHY AEAATKAVWP PAWFIAGKND
HVLGNPSDVR DMIDECGFSQ VKYTLLAKEK GNLLDYNHAG MLTARQAEQD HFVQIKQWYL
SM
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