| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1006 |
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| Symbol | |
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| ID | 4278380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1177161 |
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| End bp | 1177853 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638133774 |
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| Product | membrane protein |
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| Protein accession | YP_749697 |
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| Protein GI | 114562184 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTTTTG TTAAAGGTCT TAAGAAAAGG CAAAAAATCA GCCGGATTGT GCAAATCATT
GTCGCAATAA CCCTGATCAT CGGTCTAATG TACTTGTGGC AATCAAGTTT ACGTAATGGT
CAAAAATTAC TAAATTCACA AACAAAAGTG ATGGCAAGAC TATTAGCACA ACAAGCCGCT
AATGGTGCAG CTCCGGCAAT GTTTTTACAA AATGATGAGC AACTGCAATG GTTAGCATCA
GCACTTGCTG CGGATCCTAA AGTGATGTCG GTGAATATCT ATAATTCGCA GGGTGTAAGG
TTAGCATTTG CTCAAAGTGT TTCTTATGAA AACTTAGAAG CTGACTCTGA AATATTAAAA
GGTTTATTAA AACCGTATCC ACCTTTGATT GAAAATGTTA TTCAAGACGA CAATAATTTA
GGTTACGTTG AAGTACGTTT AAATCTTGAT ATTTTTTTCG ATGAAATAAA AATCTTGCAC
GAACAGAACA TGCAATTACA GCAGATGATG TTAATTGTAG CTGGCTTTAT TGGTTTACTA
TTATCACGGG CACTTTCATT TAAACGTGCA GATTTTGACC GCCGAAAAGC CCAAGCTAAA
TTACGTAAAA AACCTAAAAA ATCGGCCTTG CTCGCTTCAA ACGAAACGCA AGCAGACGAG
TCAGAAGAGA TACAACAAGA CCCTCCAGCC TAG
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| Protein sequence | MIFVKGLKKR QKISRIVQII VAITLIIGLM YLWQSSLRNG QKLLNSQTKV MARLLAQQAA
NGAAPAMFLQ NDEQLQWLAS ALAADPKVMS VNIYNSQGVR LAFAQSVSYE NLEADSEILK
GLLKPYPPLI ENVIQDDNNL GYVEVRLNLD IFFDEIKILH EQNMQLQQMM LIVAGFIGLL
LSRALSFKRA DFDRRKAQAK LRKKPKKSAL LASNETQADE SEEIQQDPPA
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