| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1002 |
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| Symbol | |
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| ID | 4278376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1172811 |
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| End bp | 1173584 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638133770 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_749693 |
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| Protein GI | 114562180 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000944927 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATT TAAAAAAAGC GGCACAACGT GGTATTGAGT TAATGGATTT AACCACTTTA
AATGATGATG ATACTGATCA AAAGGTCATC GATTTGTGCC ATAAAGCCAA GTCTCCAGCA
GGTAATACTG CCGCAATTTG TATTTACCCT CGTTTTATTC CTATTGCACG TAAAACATTA
AATGAACTTG ATTGTGAAGA CATTAAAATT GCAACAGTGA CGAATTTTCC ACACGGTAAT
GATGATATTG CCATCGCAGT ATTAGAAACT CGTGCAGCAG TTGCTTATGG TGCAGATGAA
GTCGATGTTG TGTTTCCATA CCGTGCATTA ATGGATGGTA ACGAAACTGT CGGTTTTGAA
ATGGTTAAAG CGTGTAAGGA AGAGTGCGGC GATGATGCGA TTTTAAAAGT TATCATCGAA
TCTGGTGTGC TAAAGGATCC TGCTTTGATC CGCAAAGCAT CAGAGTTAGC TATTGATGCA
GGTGCTGATT TTATTAAAAC ATCAACGGGT AAAGTACCGG TAAACGCTAC GCTTGAAGCG
GCTGAAATTA TGTTAACTGT CATCAGCGAG AAAAATCGCA ATGTAGGCTT TAAGCCTGCC
GGCGGTGTTC GTGATGCCGC TCAAACAGCT GAATTTTTAG ACTTGGCTGC GCGCATTTTA
GGTGATGATT GGGTTACCCC ACAAACTTTC CGTTTTGGTG CTTCTAGCTT GTTAAACAGC
TTGTTGCATA CATTAGAATT AGTAGATGCT CCTAAGCCTA CTTCAGGTTA CTAA
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| Protein sequence | MTDLKKAAQR GIELMDLTTL NDDDTDQKVI DLCHKAKSPA GNTAAICIYP RFIPIARKTL
NELDCEDIKI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MDGNETVGFE
MVKACKEECG DDAILKVIIE SGVLKDPALI RKASELAIDA GADFIKTSTG KVPVNATLEA
AEIMLTVISE KNRNVGFKPA GGVRDAAQTA EFLDLAARIL GDDWVTPQTF RFGASSLLNS
LLHTLELVDA PKPTSGY
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