| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0990 |
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| Symbol | infB |
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| ID | 4278207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1155871 |
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| End bp | 1158516 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133758 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_749681 |
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| Protein GI | 114562168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.106597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA CAAGCGTAGA AAAATTAGCA GCGGAAGTGG GGAAATCGGT TGATCGATTA
ATCGAGCAAT TCTCACAAGC TGGTATGAAC AAAAAACAAC TCGATACTGT TTCAGAAAAA
GAGAAGCAAC AGCTTCTTGA TTATCTAAAA AAACAGCATG GTGCAGATTC AGTTCCGACT
AAAATGACAT TGCAGCGTAA AACGGTGTCT ACGTTAAGTG TTGCAAGCAC TGGCGGTCAG
TCGAAAGACG TGAAGGTAGA AGTTCGTAAA AAACGTACTT TTGTTAAGCG CGATGATGCA
GAATTAGCAA AACAAGCTGA ATTAGAAACT CAAGCTAAAG CCAAAGCAGA AGCTGAAGCC
CAAGCAAAAG TGGAAGCTGA AGCAAAAGCA GCTGCAGAAG CGAAAGCTAC TGCAGATGCG
AAGAAAAAAG CGGAAGCAGA AGCCAAATTG AAATCAGAAA AAGTAAAGTC TGAACCTAAA
GTAACTAAAG TTGCTGACCC AGAAACTGCA GCAGCAAAAG TTGAAGCAGA TCGTTTAAAA
GCGACTCAAG AAGCCGTGCT TACTCAAAAG CAAAAAGATG AAGCTGCTAA AGCCGCAGAA
ACTGCGCGTC AACTTGCAGA AGTAAACTCA AAGCGTTGGG CTGAAGAAGA GCGCCAACGT
TTAGATGCTG AAAAGAATGG CGATCACCAC ATCACAACGT CTAAAGTTGC TCGTGCAGCA
GAAGACAGTT CAGATGCTGA TGATGAAAAA CGTGGCCGTC GTGCGCGCAA CAAAAACGCT
AACAAAAAAC GTGGCGGAAA AGATGCTCGT GACGGTCGTG AAAAACACAT GCGTAACCGC
AGTACAGCAC CTGAATCTAT GGCGCACGGT TTTAATAAAC CTGCTGCAGC TGTTAGTCGT
GATGTGCGTA TCGGTGAAAC TGTAACCGTA TCTGAACTAG CGCATTTAAT GGCAATCAAA
GCCACTGTTA TCATCAAGCA AATGATGAAA ATGGGCACCA TGGTAACGAT TAACCAAGTA
CTTGACCAAG AAACAGCCCA AATGGTTGCT GAAGAATTAG GTCATAAAGT TGTACTTATT
CGTGAAAACG AACTTGAGCA TCAAGTACTA AAAGATCGTG ATGATAATAT CCAACTAGAG
TCTCGTGCTC CGGTTGTGAC TATCATGGGT CACGTTGACC ATGGTAAGAC GTCATTACTT
GATTATATCC GTCGTGCGAA AGTTGCTGCT GGCGAAGCCG GTGGTATCAC TCAGCATATT
GGTGCATATC ACGTTGAAAC TGAAAACGGC ATGATCACCT TCCTTGATAC TCCTGGTCAC
GCGGCGTTTA CGTCAATGCG TGCTCGTGGT GCTAAGGCGA CTGATATTGT TATTTTGGTT
GTTGCTGCCG ATGATGGTGT AATGCCACAA ACGATTGAAG CGATTCAACA TGCTAAAGCG
GGTAACGTAC CGTTAATCGT AGCTGTTAAC AAAATGGATA AGCCAGATGC TGATCCAGAG
CGTGTTAAGA GCGAACTGTC TCAACATGGC ATCATGTCAG ATGATTGGGG CGGAGATAAC
ATGTTCGTTC ACGTATCAGC CAAAACTGGT ATGGGCGTTG ACGAATTGTT AGAAGGTATC
TTGCTTCAAT CTGAAGTGTT AGAACTTAAA GCAGTACGTG ATGGTATGGC TGCTGGTGTT
GTTATCGAAT CGCAACTTGA TAAAGGTCGT GGCCCTGTGG CGACTATCCT GGTTCAAGAA
GGTACGTTAC GCCAAGGTGA TATCGTTTTA TGTGGTCTTG AGTACGGTAA GATTCGTGCG
ATGAAAGACG AAAACGGTCA TGCTATTACT GAAGCGGGTC CATCTATTCC AGTAGAGATT
TTAGGTCTTT CTGGTGTGCC GTCTGCAGGT GATGAAGCGA CAGTGGTACG TGATGAGCGT
AAAGCTCGTG AAGTTGCATT GTATCGTCAA GGCAAGTTCC GTGATGTTAA GTTAGCGCGT
CAGCAGAAGT CTAAGCTAGA AAACATGTTT GCGAACATGG AAGAAGGCGA AGTACAAGAG
TTGAACATCG TACTTAAAGC AGATGTTCAA GGTTCTCTTG AAGCGATTTG TGAATCTTTA
GCTAAACTGT CTACAGATGA AGTTAAAGTG AATATTATTG CTCGCGGTGT AGGTGCATTA
ACCGAAACCG ACGCAACATT AGCCGCTGCT TCAAATGCGA TTCTTGTTGG TTTCAACGTC
CGTGCTGATG CACAGGCTCG TAAGACCATT GATTCAGAAA GTGTTGATTT ACGTTATTAC
AGCATCATCT ACAACTTAAT TGATGAAGTT CGTGCCGCAA TGACAGGTAT GCTAGCGCCT
GAATTTAGAC AAGAAATTAT CGGTCTTGCA GAAGTTCGTG ACGTATTTAA GTCTCCTAAA
ATTGGCGCTA TCGCTGGTTG TATGGTTACC GAAGGTATCG TTAAACGTAG CGCACCAATT
CGTGTTCTAC GTGATAACGT GGTTATCTTC GAAGGTGAAC TTGAATCATT ACGCCGCTTT
AAAGACGATG CACCAGAAGT CCGTAATGGG ATGGAATGTG GTATCGGTGT GAAGAACTAT
AATGACGTTC GTGTAGGAGA CCAAATTGAG GTCTTCGAAA CAGTCGAAAT AGCTCGCACC
TTATAA
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| Protein sequence | MADTSVEKLA AEVGKSVDRL IEQFSQAGMN KKQLDTVSEK EKQQLLDYLK KQHGADSVPT
KMTLQRKTVS TLSVASTGGQ SKDVKVEVRK KRTFVKRDDA ELAKQAELET QAKAKAEAEA
QAKVEAEAKA AAEAKATADA KKKAEAEAKL KSEKVKSEPK VTKVADPETA AAKVEADRLK
ATQEAVLTQK QKDEAAKAAE TARQLAEVNS KRWAEEERQR LDAEKNGDHH ITTSKVARAA
EDSSDADDEK RGRRARNKNA NKKRGGKDAR DGREKHMRNR STAPESMAHG FNKPAAAVSR
DVRIGETVTV SELAHLMAIK ATVIIKQMMK MGTMVTINQV LDQETAQMVA EELGHKVVLI
RENELEHQVL KDRDDNIQLE SRAPVVTIMG HVDHGKTSLL DYIRRAKVAA GEAGGITQHI
GAYHVETENG MITFLDTPGH AAFTSMRARG AKATDIVILV VAADDGVMPQ TIEAIQHAKA
GNVPLIVAVN KMDKPDADPE RVKSELSQHG IMSDDWGGDN MFVHVSAKTG MGVDELLEGI
LLQSEVLELK AVRDGMAAGV VIESQLDKGR GPVATILVQE GTLRQGDIVL CGLEYGKIRA
MKDENGHAIT EAGPSIPVEI LGLSGVPSAG DEATVVRDER KAREVALYRQ GKFRDVKLAR
QQKSKLENMF ANMEEGEVQE LNIVLKADVQ GSLEAICESL AKLSTDEVKV NIIARGVGAL
TETDATLAAA SNAILVGFNV RADAQARKTI DSESVDLRYY SIIYNLIDEV RAAMTGMLAP
EFRQEIIGLA EVRDVFKSPK IGAIAGCMVT EGIVKRSAPI RVLRDNVVIF EGELESLRRF
KDDAPEVRNG MECGIGVKNY NDVRVGDQIE VFETVEIART L
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