| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0986 |
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| Symbol | |
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| ID | 4278203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1152310 |
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| End bp | 1153092 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133752 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_749677 |
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| Protein GI | 114562164 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000192621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTCA GACGTCCTAT GGTCGCTGGC AACTGGAAAA TGAATGGTAA TTCAGCACTA
GCAGAAGAAT TATTTAAGAA GTTTGCTACA AAGCTCCAAA ATGATTCCGC TGAAGTGGTT
TTATGCCCGC CTTCAATTTA TCTTGAAAGT GTTAGGCAGC TGCTTGAAGC CAATAAGCAA
ACCTTAGACG GTGCGCTTGT TAGAATGGGT GCTCAAAATC TTAGTCAACA TGATTTTGGT
GCATATACCG GCGAAATATC CGGGCAGATG CTAAAAGATT CTGGATGTCG ATATGTTATT
ATCGGCCATT CCGAACGTCG CCGTATGTAC GGAGAGACGA GTAATATCGT GGCAGAGAAG
TTTGCCGCAG CACAAAAATA TGGTCTGACA CCGATTTTAT GCGTAGGTGA ATCAGGACCA
GCTCGTGAAG CAAGACGTAC CTTTGAGGTG ATTGCGGAAG AGCTTGATAT AGTAATTGAA
AAAAACGGTA CCATGGCTTT TGATAACGCA ATTATCGCCT ACGAACCTTT ATGGGCTGTA
GGGACAGGTA AAAGCGCAAC ACCAGAGCAG GCACAAGAAG TACATGCGTT TATTCGCAGT
CGCCTCTCTG AAGTGTCTCC CTTTATTGGT GAGAATATCA GAATTCTATA CGGTGGTAGC
GTCACCCCAA GCAATGCGGC AGATATCTTT GCCCAGCCTG ATGTTGATGG TGGTCTGATT
GGCGGTGCAA GTTTGAACTC AAGTGAGTTT TTAAGTTTAT GTACCATAGC AATGAGCGCG
TAA
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| Protein sequence | MALRRPMVAG NWKMNGNSAL AEELFKKFAT KLQNDSAEVV LCPPSIYLES VRQLLEANKQ
TLDGALVRMG AQNLSQHDFG AYTGEISGQM LKDSGCRYVI IGHSERRRMY GETSNIVAEK
FAAAQKYGLT PILCVGESGP AREARRTFEV IAEELDIVIE KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRS RLSEVSPFIG ENIRILYGGS VTPSNAADIF AQPDVDGGLI
GGASLNSSEF LSLCTIAMSA
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