| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0985 |
|---|
| Symbol | glmM |
|---|
| ID | 4278202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1150833 |
|---|
| End bp | 1152170 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638133751 |
|---|
| Product | phosphoglucosamine mutase |
|---|
| Protein accession | YP_749676 |
|---|
| Protein GI | 114562163 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | [TIGR01455] phosphoglucosamine mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000240064 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACAAA GAAAATTTTT TGGAACCGAT GGTATTCGCG GCAGAGTAGG GGCGGGTAAA
ATGACCCCTG AACTAGCATT GAAGCTCGGT TGGGCGGCAG GACGAGTATT GTCTCGAAAT
GGCACTCAAA AAGTGATTAT TGGTAAGGAT ACCCGTATTT CAGGTTACCT ATTTGAATCG
GCATTAGAAG CGGGATTATC AGCTGCTGGA TTAAACGTTT TATTACTTGG CCCAATGCCG
ACCCCTGCTG TTGCTTATTT AACTCGTACA TTTCGTGCAG AAGCTGGTGT CGTAATTAGT
GCTTCGCATA ATCCTTACTA TGACAACGGT ATCAAATTCT TCTCTACCGA TGGCAGTAAG
CTTGATGATG CTATTGAATT AGAAATTGAG GCTGAACTTG AAAAGCCGTT AGTGTGTGTT
GAGTCGCACT TATTAGGCAA GGCTCGTCGA ATTGAAGATG CTGCAGGACG TTACATCGAA
TATTGCAAAG GGAATTTTCC TGCCGACCAA ACTCTCGAAG GTTTAAAAAT TGTTGTCGAT
TGTGCTCATG GCGCAACTTA TCATATAGCT CCTAATGTGT TCCGTGAATT GGGTGCTGAC
GTGATTGCGA TTGGAGATAA ACCCGATGGA CTCAATATCA ATGATAAAGT CGGCGCAACA
TCAATGGCTA AGATTTGTGA GACTGTATTG GCTGAAAAAG CTGATTTAGG GATTGCACTC
GATGGTGACG GCGATCGTAT TATGATGGTT AATCGCCATG GTGAAGTAGT CGATGGTGAT
CAAATCCTGT ATATTTTAGC GGTAGATGCT CAAAAGCGTG GTATTTTAAA AGGCGGAGTA
GTCGGCACGT TAATGTCTAA TTTAGGCTTA GACTTAGCGC TGCAAGCACT TGATATTCCT
TTTGTTCGCT CTAAAGTTGG TGACAGGTAT GTCATGGAGA TGCTGAGGGA GAATGAATGG
CGTATAGGTG GTGAAAACTC TGGTCATATT CTCAACCTAG ATCATGGTAC TACCGGTGAT
GGTATTGTTG CAGGTATTTT AGTGTTAGCT GCGATGCGTC GTCAAAATGC ATCTCTTGAA
CAATTAACCG AGCCGATGAA GATGTTGCCT CAAGTATTGG TTAATGTCCG CTTTGAAGGG
GACTCTAATC CGTTAGATAC CGATGCGGTG AAATCTGCGC AAGCTGATGT TGAGTTGCAA
TTAGGTGCTC GCGGACGCGT TTTATTAAGA AAATCGGGTA CCGAACCGTT AATCAGAGTG
ATGGTTGAAG GTGATGATCA TCCGCAAGTG CTTGCACATG CAAATCGTAT TGCTGACGCG
GTAAAGGCAG CATGTTAA
|
|---|
| Protein sequence | MKQRKFFGTD GIRGRVGAGK MTPELALKLG WAAGRVLSRN GTQKVIIGKD TRISGYLFES
ALEAGLSAAG LNVLLLGPMP TPAVAYLTRT FRAEAGVVIS ASHNPYYDNG IKFFSTDGSK
LDDAIELEIE AELEKPLVCV ESHLLGKARR IEDAAGRYIE YCKGNFPADQ TLEGLKIVVD
CAHGATYHIA PNVFRELGAD VIAIGDKPDG LNINDKVGAT SMAKICETVL AEKADLGIAL
DGDGDRIMMV NRHGEVVDGD QILYILAVDA QKRGILKGGV VGTLMSNLGL DLALQALDIP
FVRSKVGDRY VMEMLRENEW RIGGENSGHI LNLDHGTTGD GIVAGILVLA AMRRQNASLE
QLTEPMKMLP QVLVNVRFEG DSNPLDTDAV KSAQADVELQ LGARGRVLLR KSGTEPLIRV
MVEGDDHPQV LAHANRIADA VKAAC
|
|---|
| |