| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0972 |
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| Symbol | |
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| ID | 4277770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1135127 |
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| End bp | 1135933 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638133738 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_749663 |
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| Protein GI | 114562150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000310302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTC TCGCGCTAAC CCTACTTGTT TCCGCTTTAT TAGTTGGTTG TGTTAATAGT
CAATCGCCAA CGGGTCGAGG GCAAACCCTG TTGTTTTCTG ATACGCAGAT GCAGCAAATG
GGATCTCAGT CGTTTGAGAC CATGAAGCAA AGTGAAAAAA TAAGTCAAAA CCAAGCGCAA
ACTCAATATG TGAACTGTGT TGCCAAACGT ATCACTGCGG TGTTGCCCGA CCAATCACAG
CAATGGGATG TCGTATTGTT TGAGTCAGAT CAAGTCAATG CGTTTGCGCT ACCCGGTGGC
CATATTGGTG TTTATACCGG TTTGTTAAAA GTCGCAGTCA ATCAAGATCA ACTTGCTACG
GTAATGGGGC ATGAAGTGGC GCACGTATTA GCCCAGCATG GTAACGAGCA AGTCTCTCGA
GCTCAGTTAA CGGGGCTTGG CATGCAAGCT GCGGATGCCG CATTAGGAGC ATCGGGTATT
GCCAATAAAG ATTTGTACAT GGCTGGGTTG GGGCTAGGGG CTAAAGTGGG TATTATTTTA
CCTTTTGGAC GCAGCCAGGA GTCTGAAGCT GATATTGTTG GTCTTGAGCT AATGGCCAAA
GCAGGTTTTA ATCCGGCTCA AAGTGTTAAT TTGTGGCAAA ACATGGCTAA AGCGGGCGGC
TCCCAAGGCC CTGAACTGTT ATCGACTCAC CCGTCACACA GTCACCGAAT TGAAGACTTA
CAAGCGGCAC AGAATCAAGT GATGCCGCTT TATACACAGG CAAGAAAACA GTCTTTGACT
GAGTGTAAAA TTGCTCAAGT TAAATAG
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| Protein sequence | MKPLALTLLV SALLVGCVNS QSPTGRGQTL LFSDTQMQQM GSQSFETMKQ SEKISQNQAQ
TQYVNCVAKR ITAVLPDQSQ QWDVVLFESD QVNAFALPGG HIGVYTGLLK VAVNQDQLAT
VMGHEVAHVL AQHGNEQVSR AQLTGLGMQA ADAALGASGI ANKDLYMAGL GLGAKVGIIL
PFGRSQESEA DIVGLELMAK AGFNPAQSVN LWQNMAKAGG SQGPELLSTH PSHSHRIEDL
QAAQNQVMPL YTQARKQSLT ECKIAQVK
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