Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0972 |
Symbol | |
ID | 4277770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1135127 |
End bp | 1135933 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638133738 |
Product | peptidase M48, Ste24p |
Protein accession | YP_749663 |
Protein GI | 114562150 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000310302 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTC TCGCGCTAAC CCTACTTGTT TCCGCTTTAT TAGTTGGTTG TGTTAATAGT CAATCGCCAA CGGGTCGAGG GCAAACCCTG TTGTTTTCTG ATACGCAGAT GCAGCAAATG GGATCTCAGT CGTTTGAGAC CATGAAGCAA AGTGAAAAAA TAAGTCAAAA CCAAGCGCAA ACTCAATATG TGAACTGTGT TGCCAAACGT ATCACTGCGG TGTTGCCCGA CCAATCACAG CAATGGGATG TCGTATTGTT TGAGTCAGAT CAAGTCAATG CGTTTGCGCT ACCCGGTGGC CATATTGGTG TTTATACCGG TTTGTTAAAA GTCGCAGTCA ATCAAGATCA ACTTGCTACG GTAATGGGGC ATGAAGTGGC GCACGTATTA GCCCAGCATG GTAACGAGCA AGTCTCTCGA GCTCAGTTAA CGGGGCTTGG CATGCAAGCT GCGGATGCCG CATTAGGAGC ATCGGGTATT GCCAATAAAG ATTTGTACAT GGCTGGGTTG GGGCTAGGGG CTAAAGTGGG TATTATTTTA CCTTTTGGAC GCAGCCAGGA GTCTGAAGCT GATATTGTTG GTCTTGAGCT AATGGCCAAA GCAGGTTTTA ATCCGGCTCA AAGTGTTAAT TTGTGGCAAA ACATGGCTAA AGCGGGCGGC TCCCAAGGCC CTGAACTGTT ATCGACTCAC CCGTCACACA GTCACCGAAT TGAAGACTTA CAAGCGGCAC AGAATCAAGT GATGCCGCTT TATACACAGG CAAGAAAACA GTCTTTGACT GAGTGTAAAA TTGCTCAAGT TAAATAG
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Protein sequence | MKPLALTLLV SALLVGCVNS QSPTGRGQTL LFSDTQMQQM GSQSFETMKQ SEKISQNQAQ TQYVNCVAKR ITAVLPDQSQ QWDVVLFESD QVNAFALPGG HIGVYTGLLK VAVNQDQLAT VMGHEVAHVL AQHGNEQVSR AQLTGLGMQA ADAALGASGI ANKDLYMAGL GLGAKVGIIL PFGRSQESEA DIVGLELMAK AGFNPAQSVN LWQNMAKAGG SQGPELLSTH PSHSHRIEDL QAAQNQVMPL YTQARKQSLT ECKIAQVK
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