| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0971 |
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| Symbol | |
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| ID | 4277769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1133772 |
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| End bp | 1135004 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133737 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_749662 |
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| Protein GI | 114562149 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000971191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTT CAGCGTTATC ACTCAATTCA AGTTTATTAG CCGCATTGCC ACCGACAGTG
AATAAGCCGA GTCGTATCCA ACAACTGGCT ATTCCTACTA TATTGCTGGG GCAAGATGTA
TTGGCATTAG CTCAAACCGG CAGCGGTAAA ACCTATGCTT ACGGTTTGCC TGTATTGCAA
CGCATTAGTC AGCTCTCAAC GTCTCATTTG TCTGCCGTGA TCATCGTGCC GACCAGAGAG
TTAGCATCAC AAGTATCGCA AAACTTAGCG CCGCTAGCAC GATCGCTTAA TTTACGCGTA
GAGGTACTTT GTGGCGGTGA AGCAATAGAG CTTCAAATTG AGCGCTTAGC TCAACCGGTT
AATATTGTCG TTGCTACACC GGGCCGCTTA CTCGCATTAG CTCAACAAGG TGTTATTCAG
TTTGAACACC TGCAGAGTTT GGTTCTTGAT GAAGCAGACC GATTACTGGA CATGGGATTT
ATCGCCGATA TTAATGCGCT GATAGCATTA ATGCCAAGTG GCCAGCGGTT ATTATTTTCG
GCGACGTTAC CCGAATCTTT GGTCGCATTA GCTCAAAAAG TACAGTCTGC ATCTTGCGTG
CGAATTGAAG CGCATGCTTT GAATAGTACC GTGGCTGATA TTGACCAAAC TATTTATCAC
GTCAATAAAG GCAGCAAGGC CAAAGCGCTG ACTCATTTAA TTGCTTTACA TCAATGGTCG
CAAGTATTGG TGTTTGTGAA TGCTAAAGAC GATGCTGATG CATTATGTAA AAAGTTAATT
AAGGCGGGTA TTAACGCTGC GGCGCTTCAT GGCGATAAAG AACAAGCACT GCGAAGTAAG
ACCTTAGAGC AATTCAAAAT GGCACAACTG ACCGTATTAG TCGCAACCGA TGTACTTGCG
CGCGGTATTC ATGTTGACGC ATTGCCTGTG GTTATCAATG TTGATTTGCC AGCCCAAGCA
GCTGTATATG TTCATCGTAT TGGGCGTACT GCACGCGCGG GGTTAAGCGG TGTGGCATTA
TCATTAGTCG GTCACTCTGA ATTACTCAGT TTAGAAGCTA TTCGAGAGTT AACCGGACAG
GCATTACCAT TAGTTGAATT AGCCGGTTTT GTGGTAACGG ATAAACCCAC TAGCGAAAAC
AGTAAGCGAG CGCCGCGTGA TAAACAAGCC AATCGTCGAA CCGCCAATAA ACGCAGTATT
AGTGATTTCG CTAAACGTAA ATCAACACGT TAA
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| Protein sequence | MSFSALSLNS SLLAALPPTV NKPSRIQQLA IPTILLGQDV LALAQTGSGK TYAYGLPVLQ
RISQLSTSHL SAVIIVPTRE LASQVSQNLA PLARSLNLRV EVLCGGEAIE LQIERLAQPV
NIVVATPGRL LALAQQGVIQ FEHLQSLVLD EADRLLDMGF IADINALIAL MPSGQRLLFS
ATLPESLVAL AQKVQSASCV RIEAHALNST VADIDQTIYH VNKGSKAKAL THLIALHQWS
QVLVFVNAKD DADALCKKLI KAGINAAALH GDKEQALRSK TLEQFKMAQL TVLVATDVLA
RGIHVDALPV VINVDLPAQA AVYVHRIGRT ARAGLSGVAL SLVGHSELLS LEAIRELTGQ
ALPLVELAGF VVTDKPTSEN SKRAPRDKQA NRRTANKRSI SDFAKRKSTR
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