| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0950 |
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| Symbol | |
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| ID | 4277678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1111424 |
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| End bp | 1112623 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133716 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit B |
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| Protein accession | YP_749641 |
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| Protein GI | 114562128 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1805] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB |
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| TIGRFAM ID | [TIGR01937] NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0145301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTGA AAGATTTTAT CGAACGTATT GAGCCGCAAT TTGAAAAAGG CGGTAAGTAC
GAAAAGTGGT ATGCCCTTTA CGAAGCGGCT GCGACAGTAT TTTACACTCC AGGTAAAGTG
AACAAAGGGG CAACCCACGT TCGCGATAAC CTTGACCTAA AACGTATGAT GATTACGGTT
TGGGCATGTA CATTTCCGGC AATGTTTGTC GGGATGTACA ACGTAGGTTT ACAAGCTCAA
ATAGCGATGG TGGCCGGCTT CGGTACACCT GATATTTGGC AAGTAGGCTT ATTTGAATTA
TTTGGCGCTC AACTCACCGC AGACTCTGGC ATTACGTCCT TGATGTTCTA TGGTGCGTGC
TTCTTCCTAC CTATCTATGC AGTGACATTC ATTGTCGGTG GTTTTTGGGA AGTGCTCTTT
GCGTCAGTGC GTGGCCATGA AATTAACGAA GGTTTCTTCG TTACTTCAGT GCTATTTGCA
TTAACTCTAC CGCCAACAAT TCCTTTATGG ATGGTCGCTT TAGGTATTAC CTTTGGTGTG
GTTGTAGCAA AAGAAATCTT CGGTGGCACA GGGCGTAACT TCTTAAACCC TGCATTAGCT
GGCCGTGCTT TCTTGTTCTT TGCTTACCCA TTAAGCATGT CTGGTGATAC CTCATGGGTT
GTTGCGGACG GCTTCTCTGG TGCAACAGCA TTGAGTCAAG CTGCGCAAGG TACTTTTGAT
TACACTTCAA ACGCTAACTG GATTGATGCT TTCATGGGCT TTATTCCGGG TTCTGTTGGT
GAAGTATCGA CCTTTGCTAT TTTGCTCGGT GGTTTAGTCA TTATCTACAC CCGTATTGCC
TCGTGGCGTA TTGTGGGTGG TGTAATGTTA GGTATGGTGG CAATTTCTAC TCTACTTAAT
CTTATTGGTA GCGACAGCAA CCCGATGTTT GCAATGCCGT GGCATTGGCA CTTAGTGTTA
GGTGGTTTTG CATTTGGTAT GATGTTTATG GCGACAGATC CTGTTTCTGC GTCGTTCACA
AATAGTGCTA AATGGGCATA CGGTTTCCTC ATTGGTGCAA TGGTGGTGTT TATCCGTGTG
GTTAACCCTG CATTCCCAGA AGGTATGATG TTAGCTATCT TGTTTGCTAA CTTATTTGCT
CCATTATTTG ACCACTTTGT AGTACAGGCA AATATTAAGC GGAGGATTGC TCGTGGCTAG
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| Protein sequence | MSLKDFIERI EPQFEKGGKY EKWYALYEAA ATVFYTPGKV NKGATHVRDN LDLKRMMITV
WACTFPAMFV GMYNVGLQAQ IAMVAGFGTP DIWQVGLFEL FGAQLTADSG ITSLMFYGAC
FFLPIYAVTF IVGGFWEVLF ASVRGHEINE GFFVTSVLFA LTLPPTIPLW MVALGITFGV
VVAKEIFGGT GRNFLNPALA GRAFLFFAYP LSMSGDTSWV VADGFSGATA LSQAAQGTFD
YTSNANWIDA FMGFIPGSVG EVSTFAILLG GLVIIYTRIA SWRIVGGVML GMVAISTLLN
LIGSDSNPMF AMPWHWHLVL GGFAFGMMFM ATDPVSASFT NSAKWAYGFL IGAMVVFIRV
VNPAFPEGMM LAILFANLFA PLFDHFVVQA NIKRRIARG
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