| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0949 |
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| Symbol | |
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| ID | 4277677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1110090 |
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| End bp | 1111424 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133715 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit A |
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| Protein accession | YP_749640 |
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| Protein GI | 114562127 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
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| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00658767 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTACAA TTAAGAAAGG ATTGGAACTG CCTATAGCAG GCGGACCAGA GCAAGTTATC
CATAATGGCC CAGCCATTAG ACACGTAGCG ACTTTGGGTG AAGAGTATAT TGGCTTACGT
CCAACGATGA AAATCAAAGT GGGCGACAAA GTACAAAAAG GCCAAGTTCT TTTTGAAGAT
AAAAAGAATT TAGGCGTTAA ATATACGGCT TTAGCCAGTG GTACTATTTT AGAAATCAAC
CGAGGTGCAA GACGTGTACT TCAGTCAGTT GTTATTGCTG TGGAAGGTGA CGATAGCGTT
GCTTTTGCTC AATACGATGC TGATAAGTTA GACACGTTAG ACGCACAAGT TGTTCGTGAT
AATCTGATTG ATTCAGGTTT GTGGACTGCT TTGCGTACAC GCCCATTCAG TAAAGTGCCA
GCTGTAGATG CTACTGCTGC GGGTATTTTC GTTACTGCAA TTGATACTCA ACCTCTTGCT
GCCGATCCTG TGGTAGTCAT CGCTCAACAT AAAGAAGATT TTGCTAATGG CCTTAAAGTC
CTAGCACGAT TGACTGAAGG TAAAGTTTAC CTATGTAAAG CTCAAGGTGC TGATATCCCT
GCAGCTAATG CCCAAGTTCA AGAGTTTGCG GGTAAACACC CAGCAGGTCT TGCGGGTACG
CATATTCATC ACGTTCTTCC AGCTTCGGCA ACACGTACTG TTTGGCATAT TGGCTATCAG
GATGTGATTG CTTTTGGTCA ACTGTTCACC CAAGGTGTAT TAAACACTGA GCGTGTGGTT
GCGATTGGCG GTCCTAAAGC GAAAAAACCT CGCCTTGTTC GTACCGTTTT AGGTGCTAGC
ATGGCTGAAC TGACTGCTGA TGAAACGGTC GGTGATGGTG TTCGTGTGAT CTCAGGTTCA
GTGTTAAGCG GCCGTACTGC GGTAGGCCCT CAAGCTTATT TGGGGCGTTA TCATCAGCAG
GTGAGTGTAC TAGAAGAAGG TGACGAGAAA GAATTGTTTG GTTGGGCTAT GCCTGGCGTA
GATAAGTTCT CTATCACTCG TTCGTTCTTA GGTCACTTAA GCCCGTCACG CTTATTTAAT
ATGACCACTA GCACCGGCGG TTCCGACCGT GCAATGGTAC CTATTGGTAA CTATGAACGC
GTGATGCCTT TAGACATTCT ACCTACTATG CTACTTCGTG ATTTACTCTC TGGCGACTTT
GATGGCGCAG TTCGTTTAGG CGCACTAGAG TTAGATGAAG AAGATTTGGC ATTGTGTACG
TTCGTATGTC CAGGTAAGTA TGACTACGGT TCATATTTGC GTGACTGTTT AGATACGATC
GAGAGGGAAG GCTAA
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| Protein sequence | MITIKKGLEL PIAGGPEQVI HNGPAIRHVA TLGEEYIGLR PTMKIKVGDK VQKGQVLFED
KKNLGVKYTA LASGTILEIN RGARRVLQSV VIAVEGDDSV AFAQYDADKL DTLDAQVVRD
NLIDSGLWTA LRTRPFSKVP AVDATAAGIF VTAIDTQPLA ADPVVVIAQH KEDFANGLKV
LARLTEGKVY LCKAQGADIP AANAQVQEFA GKHPAGLAGT HIHHVLPASA TRTVWHIGYQ
DVIAFGQLFT QGVLNTERVV AIGGPKAKKP RLVRTVLGAS MAELTADETV GDGVRVISGS
VLSGRTAVGP QAYLGRYHQQ VSVLEEGDEK ELFGWAMPGV DKFSITRSFL GHLSPSRLFN
MTTSTGGSDR AMVPIGNYER VMPLDILPTM LLRDLLSGDF DGAVRLGALE LDEEDLALCT
FVCPGKYDYG SYLRDCLDTI EREG
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