Gene Sfri_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0944 
Symbol 
ID4277672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1104237 
End bp1104896 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID638133710 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_749635 
Protein GI114562122 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGGAT TTCAACATGG ATTAGATTTT GGTGAGCTAC AAAATGGCTT AACTCAAGAT 
ACCGTCGTTG TGCCAACGGC GACTAACCAA ATCAGTCCGC CGGTTACTTG GATTAAAGGT 
TTTTTGTCAC CCAAGCAGCA ACAGTTGTTA ATGATGGAAG TAGAGCAATA CCCATTAGAT 
CGCGTGGAGA TTGAAGTCTA TGGCAAGCAG CATTTTATTC CTCGCACCCA AGCTTGGTTT 
GGCGACCAGG GTTGTGATTA TCACTATTCA AAATTACACA TCACCGCGCT GGCTTGGCCA 
AAAGTGTTAA GCCGATTACG GGCAAAACTG CTTAGTGAGC ATCAAATAGA CAGTAACTCA 
GTGTTAGTTA ATCGCTATGC CGATGGCCGT GACTGTATGG GCTGGCACAG TGATGATGAA 
CCTGAAATTA TCACCGGTTC GGCAATTGCT TCTGTCACGT TAGGCGCCTG TAGAGATTTT 
GTTGTGCGCC ATAAACCGAC GCAAACCAAA GTTACTTTCC CTTTGGCATC AGGCGACTTA 
CTCATTATGC ATCCTGGTAT GCAGCAACAC TGGCAACATG CTTTACCTAA GCGCCTTAAA 
GTGACTGAAC CGCGTATTAA CTTCACTTTT CGGCACATTA TTGCTAATTA CTACCGTTAA
 
Protein sequence
MAGFQHGLDF GELQNGLTQD TVVVPTATNQ ISPPVTWIKG FLSPKQQQLL MMEVEQYPLD 
RVEIEVYGKQ HFIPRTQAWF GDQGCDYHYS KLHITALAWP KVLSRLRAKL LSEHQIDSNS 
VLVNRYADGR DCMGWHSDDE PEIITGSAIA SVTLGACRDF VVRHKPTQTK VTFPLASGDL 
LIMHPGMQQH WQHALPKRLK VTEPRINFTF RHIIANYYR