Gene Sfri_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0943 
Symbol 
ID4277671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1103238 
End bp1104206 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content40% 
IMG OID638133709 
ProductMg2 transporter protein, CorA family protein 
Protein accessionYP_749634 
Protein GI114562121 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATAC AAATACTATT ATTTAATGCG CAAGGTCAGC TGTTATCACA AGGTGATGAG 
ACTCTCATGA GCCAGTATGA TCCAAAACTG CAGCTAATAT GGGTCGATAT TTCAGGCCAG 
CATAGCCAAG CGTTTTTCAA GCAATACCCT TTGTTTGGCA TTGATCATCT CGATTTTGAA 
GAAGCACAGC GAGAACGTCA CCCACCCCAG TTTGAAGAAT ATGATTCACA TTCATATTTG 
TTAACCCACG AGCTTATGGC TAGAGATGAG TATCTTCTGC TCGAACGCAG CCAGTTATTG 
CTGCATGTCA ATGACCGCTT CTTGGTTACC CAACACCTGA AACCTTCTAT CAGTGTTAAC 
AAAGTGATCC AACGAATTAG TGCACAAGGT TGCCTCGAAA GTACAGAAAT GAGCCGAGTC 
AGTTTTGAAT TGATGCGCCA AATTGTGATT GATTATCTGG CGGTGATGTT GGCATTAGAA 
GAGCGTTTAG GGGAAATAGA AGATGAAATT TTTGATGTGT CTACTGATGA TTTATTAGCA 
GAGCTAATCG CTTATAGCAG TAAGTTACAA AAAGCCAAAC GTTCGTTTAG TTACCACGAA 
GAAATCTTGC AACAATTACT TGGCGATGAC ACCCATCTGC ATATTAAGAT GGACTATGAA 
CAATTGAGCT ATTTATATAA TCAGTTTGAA CGCCTATCCA GTCGTGCCAG TCTTTATCAA 
GGTTTAGTGG ACAGTTTAAT CAATGGTTAT ATTTCGGTGA GTGCCCATAA AACTAACCGG 
GTGATGATGA CGTTAACAAT GGTCACTGCG ATTTTTTTAC CGTTAACATT AGTCGCCGGC 
ATTTACGGAA TGAACTTTGA CAATATGCCT GAATTAAAAT GGCATTTTGG TTATTTTTCG 
GTATTAATCC TAATGGCAGT CATTGTGGTT TCAGGTTTAT GGATTGCGAG AATCAAGCGT 
TGGTATTAA
 
Protein sequence
MTIQILLFNA QGQLLSQGDE TLMSQYDPKL QLIWVDISGQ HSQAFFKQYP LFGIDHLDFE 
EAQRERHPPQ FEEYDSHSYL LTHELMARDE YLLLERSQLL LHVNDRFLVT QHLKPSISVN 
KVIQRISAQG CLESTEMSRV SFELMRQIVI DYLAVMLALE ERLGEIEDEI FDVSTDDLLA 
ELIAYSSKLQ KAKRSFSYHE EILQQLLGDD THLHIKMDYE QLSYLYNQFE RLSSRASLYQ 
GLVDSLINGY ISVSAHKTNR VMMTLTMVTA IFLPLTLVAG IYGMNFDNMP ELKWHFGYFS 
VLILMAVIVV SGLWIARIKR WY