| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0940 |
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| Symbol | |
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| ID | 4277668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1100216 |
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| End bp | 1101841 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133706 |
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| Product | membrane-flanked domain-containing protein |
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| Protein accession | YP_749631 |
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| Protein GI | 114562118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACTA ATCGGTCATT CGCCGTAAAT GTTGCCGACG CGGTCAAAAC TGTTGATGGG
GAGACAGAAA ACAATAGCGT TGATGCAAAG CTCAACGACA ATCCGACAAA TGATTTTCAA
CAATGGCAAG CATTGTCAGC TTGGTCAATT GTCAGTAATA TTTTCAGTAC GTTGAAAAAT
ATCCTCAGTA ACGGTTTCGC TATCGTGCCA ATCGTGTATA CAGGGTGGCA ACAAGGTTTT
GATATGCAGT GGGGCATATT GGCCTCGAGT GTTTTATTAA TACTGGTGAC AATTTTTGCG
ATAATAGAAT GGCGTAAATT TCGTTTTCGT CTTCATAACC ATCAACTTGA AGTCAGACGC
GGTTTAATAT TTACCAAAAA GGATGAAATA CCGCTAAGCC GAATACAAAA TATTCGTTAT
GAACAGCCGT TTTACTTTAA GCCGTTGTCT CTCGGCACTT TGGTGATTGA AACCGCTGGT
TCTAAAAAAG ATGAAGCTCA TTTAGCCGCA TTAGATACAT TACAGGCGCA AACGTTAAAA
CGTTTACTGT TAAATTTAAG CCATACAAAA GTAACCTCGA CAGATGAACT TCAGCAGGCA
AACAGTCAAC AAAACATCGA TAACACCCAA CCTATTGTGC GTAAAAGTTT AGCTGATTTA
GTCTTATTTG GTTTTTATCA AAACAATTTT ATTTGGTTTG CTGTTATCGC AGGCCCCATA
GCAGGCCAAA TAGATTGGGA TAAAATATTC GACTCACCGC TTGCGCAACA GTTTTGGCTG
TGGGTCCAGC AGCAAACCCA TCAAAACATT GGTTTGCAAA CTATTATGCT AATCGTGGCC
TTGTTTGCGA TTTACAGTTT GTTTTCGTTA ATTTCAATTG TGGCGGCCAT TTTAAAATAT
CATCCATATC AGCTCGACAA ACATGATGAC ACCATACAGC GAAGTGGCGG TGTCATTTCA
CATCAACAAG ATGCACTGGC CATAAAACGA ATTCAATTAG TCCAGGTTCA ACAACCCGCT
ATTGCACGTT TATTTAACCG CTGGACCTTA TATTTTAAAC AAGTCAAAGG CCATGAGGTT
GAACAAAAAA CCAAACAGCA CATGCTCGTT CCTAGTGTAA AGTCCACTGA AATTGAATCA
CTCCTAGCTA GTATTCCCCA ACTCAGTGGC GGCGCAAGTG CATTACCCAA TAGTTATAAG
CCTATCCATA TAAATTGGCT GACAAAGCGA ATCGTTTTAC CGCTGTTTCC AGCTATCGTA
CTCACTATTG TGGGTTACTA TGGTCATCAT AGCCTTGAGT TTTTTGAGTT CACTTGGTTT
GCTGCAACCA TGATCATGTT AGCGATTTAC ATTCGTTATA AACAATGGGG ATATGTAGTG
GCAGATAAGG TTATTTGGCA GCATAGCGGC TTTTTCGGTC AACAATGGAA ACGGGTCGCA
TTTGAAAAAG TTCAACACGT TAAAATTACC CAAACTAAAA GCCAAAAGCA TGCTCAGCTA
GCCTATGTTG AAATCGGTTT GGCCAGTGGC AACGTGGTAT TTCCGTATAT TCCCACATCG
GTTGCACAAC AGATTGTGGC TCAGTCGCTC AATGCCACAG TCAATAATAA CCAAAATTGG
ATTTAA
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| Protein sequence | METNRSFAVN VADAVKTVDG ETENNSVDAK LNDNPTNDFQ QWQALSAWSI VSNIFSTLKN
ILSNGFAIVP IVYTGWQQGF DMQWGILASS VLLILVTIFA IIEWRKFRFR LHNHQLEVRR
GLIFTKKDEI PLSRIQNIRY EQPFYFKPLS LGTLVIETAG SKKDEAHLAA LDTLQAQTLK
RLLLNLSHTK VTSTDELQQA NSQQNIDNTQ PIVRKSLADL VLFGFYQNNF IWFAVIAGPI
AGQIDWDKIF DSPLAQQFWL WVQQQTHQNI GLQTIMLIVA LFAIYSLFSL ISIVAAILKY
HPYQLDKHDD TIQRSGGVIS HQQDALAIKR IQLVQVQQPA IARLFNRWTL YFKQVKGHEV
EQKTKQHMLV PSVKSTEIES LLASIPQLSG GASALPNSYK PIHINWLTKR IVLPLFPAIV
LTIVGYYGHH SLEFFEFTWF AATMIMLAIY IRYKQWGYVV ADKVIWQHSG FFGQQWKRVA
FEKVQHVKIT QTKSQKHAQL AYVEIGLASG NVVFPYIPTS VAQQIVAQSL NATVNNNQNW
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