Gene Sfri_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0939 
Symbol 
ID4277667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1099651 
End bp1100211 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID638133705 
Producthypothetical protein 
Protein accessionYP_749630 
Protein GI114562117 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA TACAAACAAC AAATGTCAGC GTAGACGATA TTATCGATTT TTGGTTTGTT 
CAAATATCCT CAAAACAATG GTGGGTAAAA AATACCGAGT TAGATTTGCA GATAAAAAAA
ACATATGGCG CCACATTACA GGCGGCTATC AAGGGTGAAT TACAACATTG GCGTAAAGAT
GCCCAAGGTC GATTGGCCGA AATAATCGTA TTAGATCAAT TTTCGCGAAA CATTTATCGC
GATACTCCAG CCGCATTTTC CGCTGACAAT ATCGCGTTGG AGCTTGCACA ACAGGCTGTT
ACACTCGGTT GTTTAGCAGA GTTACCCGTG CACCAGGCTG CATTTTTAAT CATGCCATAC
ATGCATAGCG AATCGATGGA GATCCACCAG CAAGCTTTGC CATTGTTTGA ACAATATGCA
CCCAACAATT TACCAAGCCA GCATCAGCAT CAAGCGATTA TTGCGCAATT TAATCGCTAT
CCACATCGTA ATGCCATTTT AGGTCGTGAA TCTACGGCTG CCGAACTCGC ATTTTTAACA
CAACCGGGTT CTCGCTTTTA A
 
Protein sequence
MNEIQTTNVS VDDIIDFWFV QISSKQWWVK NTELDLQIKK TYGATLQAAI KGELQHWRKD 
AQGRLAEIIV LDQFSRNIYR DTPAAFSADN IALELAQQAV TLGCLAELPV HQAAFLIMPY
MHSESMEIHQ QALPLFEQYA PNNLPSQHQH QAIIAQFNRY PHRNAILGRE STAAELAFLT
QPGSRF