| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0925 |
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| Symbol | |
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| ID | 4277338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1089382 |
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| End bp | 1090494 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133691 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_749616 |
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| Protein GI | 114562103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000914337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGTAT TTAGATATCT TATTAGTGAA GTTTTAAAAG CACAATTTGC GGTACTTTTG
GTGCTGCTAA CTATTTTTAT TAGTCAACAA TTCGTGCGCG TGTTAGCCGA TGCATCTGAT
GGCGAATTCC CCGCTTCTTT AGTGATGACA TTATTAGGGT TAAACCTGCC TCAATTGACG
GTATTAGTGT TACCGCTGAG TTTCTTTTTA GCAATATTGT TGGCTCATGG GCGAATGTAT
GCTGAAAATG AAATGGTGGT ATTGCATGGC GTCGGTGTGA GTGAATGGTA TGTCACTCGC
GTAACGTTAT TGCTTGCTTT TGCCAATTTA TTATTCACGG CTTATTTGTC GGTTTATGTC
GGACCGTGGG CAGAAGAACG TCAGAATCAG GTATTAGAGA AAGCGCAATC CGAAGCTGGA
TTAGCAGCCT TAACGCAAGG TCGTTTTCAA GCTAGCCCAA ATGGTCGAGC CGTTTTGTTT
GTTGAGAAAA TAAATAAAGA CAATACCTTA GATAAAGTCT TTGTAGCGCA ACTCCCTGAT
CCGGAAGACG AAAATGGCCT GACAAATATT GTAGTTGCCA ATAAAGGTCG TGTGATTGAA
GATAATATTG GCAGTCAGCA GTTACAACTT GAAAAAGGCT TCCGTTATCA GGGCAGTCCT
AAATCACTCG AACTGCAAGT GATTGAGTTT GGTGGTTATA AAATGGAGAT TAAAGAACAG
GAAGTTGATG AGAGGCGACG TAAATTATCT GCAATGCCAA TAGACGAATT GTTAGATACT
CCAGGACCAG AAGCTGCAGC TGAATTTCAA TGGCGACTAG CTATCCCTAT CGCGATCCCA
TTGTTGACCT TAATTGCCGT GCCGTTAGCG CGGGTTAATG TGCGCCAGGG TAAGTTTGCT
AAAATGGGTC CCGCTATTTT GCTTTATTTA GGTTACTTTG GATTAATGAT TGCAGGCCGA
AAAGCCCTGC AAGATGAGGT GGTGCCGCAG TATTTAGGCA TGTGGTGGAT CCATGGCTTT
GCGTTGTTAT TAGGGTTGTT GTTACTCATT AAAGAGCGCC CTACAGGGAT GAAGTTCTTA
GGCTTATTTA AACGTAAGCA GGTGATGGCA TGA
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| Protein sequence | MIVFRYLISE VLKAQFAVLL VLLTIFISQQ FVRVLADASD GEFPASLVMT LLGLNLPQLT
VLVLPLSFFL AILLAHGRMY AENEMVVLHG VGVSEWYVTR VTLLLAFANL LFTAYLSVYV
GPWAEERQNQ VLEKAQSEAG LAALTQGRFQ ASPNGRAVLF VEKINKDNTL DKVFVAQLPD
PEDENGLTNI VVANKGRVIE DNIGSQQLQL EKGFRYQGSP KSLELQVIEF GGYKMEIKEQ
EVDERRRKLS AMPIDELLDT PGPEAAAEFQ WRLAIPIAIP LLTLIAVPLA RVNVRQGKFA
KMGPAILLYL GYFGLMIAGR KALQDEVVPQ YLGMWWIHGF ALLLGLLLLI KERPTGMKFL
GLFKRKQVMA
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