| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0920 |
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| Symbol | |
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| ID | 4278624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1083338 |
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| End bp | 1084093 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133686 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_749611 |
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| Protein GI | 114562098 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT TGGTGTTAGT TACTGGCGGT AGTCGTGGTT TAGGCAAGAA TGCCGCATTA
ATGTTGGCGG CTAAAGGCAT GGATGTGGTG ATTACATATT TACATAACAA GGAGGCTGCA
GATGAGGTTG TCGCCAGCAT ACGTTGGTTA GGGCAAAAAG CCGCAGCATT ACCGCTGAAT
GTTGGCGATG TTTCCATGTT TGGGTCATTT ACAGATGAGC TCTCTGAGTT ACTAAGCCAA
TATTTTGAAC GCGAGAATAT TGATGCATTG ATTAACAACG CGGGAATGGG TGAGTTCGCT
GCATTTGCAG ACACAACTGA AGCTCAGTTT GATGGGTTAA TGAATGTGCA TTTAAAGGGA
GCTTTTTTTC TAACTCAATC GTTACTTCCT TTGGTCAATA ATGGTGGAAA AGTGATTAAT
GTGAGTTCTG GGTTAACACG TTTTAGTGAA ACGGGGTTCT GTGCTTATGC CATGATGAAA
GCGGGTGTTG AAGTGATGAC CCGCTATTTA GCTTTAGAGC TTGGGCCTCG TCAGATAAGC
GTCAATACCT TAGCTCCAGG GGCAATAGAA ACCGATTTTG GTGGTGGCGT TGTGCGTGAT
AATACTGCCC TAAATGAGTC TATCGCATCA AAAACGGCAC TTGGGCGTGT TGGTTTGCCG
GATGATATTG GTAAGGCGAT GTTGATGTTA TTAAGCGACG AAGCGCAGTG GTTAAATGGT
CAGAGAATTG AAGTGTCTGG AGGAATTCAT TTGTAA
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| Protein sequence | MNKLVLVTGG SRGLGKNAAL MLAAKGMDVV ITYLHNKEAA DEVVASIRWL GQKAAALPLN
VGDVSMFGSF TDELSELLSQ YFERENIDAL INNAGMGEFA AFADTTEAQF DGLMNVHLKG
AFFLTQSLLP LVNNGGKVIN VSSGLTRFSE TGFCAYAMMK AGVEVMTRYL ALELGPRQIS
VNTLAPGAIE TDFGGGVVRD NTALNESIAS KTALGRVGLP DDIGKAMLML LSDEAQWLNG
QRIEVSGGIH L
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