| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0914 |
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| Symbol | |
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| ID | 4278618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1076067 |
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| End bp | 1077602 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133680 |
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| Product | major facilitator transporter |
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| Protein accession | YP_749605 |
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| Protein GI | 114562092 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTA ATTCACACTC AGGCAATGAC TTGAGTGAAG TAAAACAGTT AGGCATGTGG
GCCGCTATCA GCAGTTTAGG CTATATATTT TGGCTTGTCG GTGGCATGGA GCTAATAGAA
CGTATTGCCT ATTATGGTGT AAAAGCCAGT GCCGGCTTGT ACGCTAAAGC GCCTGTTTCA
GAAGGCGGAC TGGGTATTAA TTTAAGTGAT TACGGTATTA TTATATCCGT GTGGGCGCTA
CTACAAACCT TTGTACCTGT GTTAACTGGC GGAATTTCTG ACCGTGTCGG TTACAAAGAA
ACCATTTTCG TTTCTACCAT CATCAAAATA TGTGGTTATT TAACCATGGC ATTCTTTCCC
AGTTTCTGGG GCTTTCTTGC CGGTGCCATG TTGTTAGCCA TGGGTACAGG GGTATTCAAA
CCAGGTATTC AAGGCACCTT AGTACTGTCA ACTAACCGAA ATAATACTTC AATGGCTTGG
GGCATTTTTT ACCAAGTGGT TAACATCGGT GGATTTTTAG GTCCATTGGT TGCGGTACAC
ATGCGTCAAT TATCTTGGGA TAATGTATTT TACGCCTGCG CAGCGATTAT CTCGTTTAAC
TTTTTATTCT TATTAGCTTA TAAAGAGCCT GGCAAAGCTG AGCGCTTAGA GCGCGCACGC
CAAGTAAAAA CAGGAGAGAT AACACAACAA GCATTGTGGA AGGATGCCTT AGGAGAACTA
AAAAAGCCTG TGGTGATTTA CTACATGCTG GTGTTTGCTG GTTTTTGGTT TTTATATAAC
TCATTATTTG ATGTATTGCC TATTCACATT GCGGAATGGG TTGATACCAG CGTCATTGTC
ACCTCTTTAT TTGGCCCAGA AGGCACCAGC AGCGGCATAT TGCAGTTCTG GTTAGGCTTG
AATAATGACG GCACCAAAGT GATGCCAGAG GGTATGCTCA ACCTCAATGC AGGGATGATC
ATGACCACTT GCTTCATTGT TGCAGCGCTT ACGGCTAAAT ATCGTATTAC CACAGCCATG
TTTGTTGGCT GTTTATTGAG TATTTTAGCC ATTGCCTTGG TCGGTGCATT TAATGCGGCT
TGGATGATTG TACTGGCTAT TGCCATGTTC TCTGTCGGCG AAATGATGAT CAGCCCCAAG
AAAAACGAAT TTATGGGGAA CATCGCACCT GAAGGTAAAA AAGCCATGTA TTTAGGCTTT
GTCATGCTTC CTCAAGGCAT AGGCTGGACG TTGGAAGGTT ATTTCGGCCC TAAACTGTAT
GACATGTACG CTTCAAAAGA ACGCATCGCC CGTGAAGCTC TGTCTGAACA TGGTATGAAC
TTAACCGATA TTGCTAACAT CCCTCAAGGT GAAGCATTTA GTCGCTTAGT CAGCGTAACA
GGTCAAGACC CACAGGCATT AACCCAAGCT TTATATCAAG CCAACAATAT CGGCATGGCT
TGGTATATTA TCGCCGCTAT TGGGATTATT TCAGCGGTAG GTATATTCAT CTATGGGAAA
TGGCTATTAA GGATGCAGCG CCAACAAGTG GCGTAG
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| Protein sequence | MSTNSHSGND LSEVKQLGMW AAISSLGYIF WLVGGMELIE RIAYYGVKAS AGLYAKAPVS
EGGLGINLSD YGIIISVWAL LQTFVPVLTG GISDRVGYKE TIFVSTIIKI CGYLTMAFFP
SFWGFLAGAM LLAMGTGVFK PGIQGTLVLS TNRNNTSMAW GIFYQVVNIG GFLGPLVAVH
MRQLSWDNVF YACAAIISFN FLFLLAYKEP GKAERLERAR QVKTGEITQQ ALWKDALGEL
KKPVVIYYML VFAGFWFLYN SLFDVLPIHI AEWVDTSVIV TSLFGPEGTS SGILQFWLGL
NNDGTKVMPE GMLNLNAGMI MTTCFIVAAL TAKYRITTAM FVGCLLSILA IALVGAFNAA
WMIVLAIAMF SVGEMMISPK KNEFMGNIAP EGKKAMYLGF VMLPQGIGWT LEGYFGPKLY
DMYASKERIA REALSEHGMN LTDIANIPQG EAFSRLVSVT GQDPQALTQA LYQANNIGMA
WYIIAAIGII SAVGIFIYGK WLLRMQRQQV A
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