Gene Sfri_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0906 
Symbol 
ID4278610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1066181 
End bp1066564 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content43% 
IMG OID638133672 
Producthypothetical protein 
Protein accessionYP_749597 
Protein GI114562084 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACGA TACTGATATG TTTATTGATT GCCATGCTGT TGCCGTATGC GGCAAAAGTT 
CCATTAGCGA TGGCAATGGC TAAATTGGGC CGATATGACA ATGACCATCC AAGAGCGCAG
CAAGCTCAAT TAACCGGTTT TGGCGCGCGG GCATTAGCAG GACATCAAAA TGCATTTGAA
TCGCTAATCG TATTTGGGAT TGCAGTATTA ACCGCATTGA TCACCAATAA TGTTACCGAT
GTCGTTGCGC TTTTAGCCAT AGTACATGTG GTCGCACGGC TGGTTTACCA TGCGCTGTAT
TTATTGAATT TTGGAACATT ACGTTCATTA TCTTGGTTTG TGGCCATAGG TGCATCGATA
GGGATATTTT GCCAAGCGTT TTAA
 
Protein sequence
MQTILICLLI AMLLPYAAKV PLAMAMAKLG RYDNDHPRAQ QAQLTGFGAR ALAGHQNAFE 
SLIVFGIAVL TALITNNVTD VVALLAIVHV VARLVYHALY LLNFGTLRSL SWFVAIGASI
GIFCQAF