Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0900 |
Symbol | |
ID | 4276997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1059076 |
End bp | 1060284 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133666 |
Product | hypothetical protein |
Protein accession | YP_749591 |
Protein GI | 114562078 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.886297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACATA TCAAACCGAT TTTATCCAGT TTAATGCGCA GTAAAAGTGC GCCGGTTTTA TTGCTATTGC AGATTATTTT GTCAGTTGCG ATAGTCGCCA ATGCGAGCTT TATTATTAAC GAACGTTTGT CGCTAATGCA GCGAGAATCT GGCTATGCCG AAGATCAGAT CCTGACCTTT AACCTGTATA ATTTCGATCC TGCTATCGAC AACATGAAAC AAAACCAAGT TGACCAACAA ATTTTGCGTT CGCTGCCCAA TGTAATTGAT GCCAGTTACA GCAATATGTT GCCGTTAAGC GGCAGCGGAT GGATGGATCG CTATGTTGAC GGCCCAGATG CCGATACCGC TAAAAGCACC CCTGGGTTTG CCTTTTATTT GGGTAATGAG CACTTACTCA ATGTGATGGG AGCGAAGTTA ATTGCCGGGC GAAATTTTAC CGCCGATGAA ATTAATACCA GCTTAGATGA CAGCGGCATG ATGGCGTTAG TGTCGCAACC GTTAGCCAAA GCCTTTTGGG GCGATGAGTC ACCTTTAGGT AAAACCATGT ATCAAGGTGA GCAAGCCGTG ACCATTATAG GCGTAGTGGA TAAGCTGCAA GGTGCTTGGG TTGACCACGA AAACTTTGAA TACAGCGTGA TCCAGAATAT CGATTTTGGT GGCAGTAGTA GTAATAAATC ATACATGGTG CGGGCATTAC CTGAACATAT TCCAGCGTTA GAAGAAGCCA TTAGTAAAGC CTTGTATGCA GAAAACCCAA ACCGTGTAGT GGAGAACTTC CAAACACTCA CCACGATTAA AAATTTAACT TACAGTAACC ACCGTTTAAT GGCGACAGTG TTAAGTATTA TGGTGGTGTT ATTGTTATTA ATTACAGCGT TGGGATTAAC CGGTATGGTG ATGTTTAATA TTCAACGCCG CACCAAACAA ATAGGCACTC GCCGCGCGCT GGGTGCACGT AAGCGTGACA TTATTGAATA CTTTATGGTG GAAAATTACC TAATTTGTAT TGTCGGTGGG GTCATCGGTG GCATGCTATC GTTAGTACTT GGGCAGCAAT TAATGTCACT GTATAGCTTG CCTATGGTGC CAGTGATTTA TCCGATTGTA TCTGTTATTG GTTTGCTGGT AGTGACAACG CTAGCGGTAA TAGTGCCGGC CGCTAAAGCC GCGAATATTT CACCCGCCAT GGCAACGCGC AGTGTGTAA
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Protein sequence | MLHIKPILSS LMRSKSAPVL LLLQIILSVA IVANASFIIN ERLSLMQRES GYAEDQILTF NLYNFDPAID NMKQNQVDQQ ILRSLPNVID ASYSNMLPLS GSGWMDRYVD GPDADTAKST PGFAFYLGNE HLLNVMGAKL IAGRNFTADE INTSLDDSGM MALVSQPLAK AFWGDESPLG KTMYQGEQAV TIIGVVDKLQ GAWVDHENFE YSVIQNIDFG GSSSNKSYMV RALPEHIPAL EEAISKALYA ENPNRVVENF QTLTTIKNLT YSNHRLMATV LSIMVVLLLL ITALGLTGMV MFNIQRRTKQ IGTRRALGAR KRDIIEYFMV ENYLICIVGG VIGGMLSLVL GQQLMSLYSL PMVPVIYPIV SVIGLLVVTT LAVIVPAAKA ANISPAMATR SV
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