Gene Sfri_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0895 
Symbol 
ID4276992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1051732 
End bp1052598 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content43% 
IMG OID638133661 
Productperiplasmic binding protein 
Protein accessionYP_749586 
Protein GI114562073 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTACGTG TATTTTTAAC GCTCATCACA GTGATATGGC TCTCGTCTAT ATCACTTTTT 
TTACCCGCGG CTGAACCGAC GGCTTCTGAT GATTTACAAG ATAAGCCGCC AGCAAAACGG
ATTATTGCTC TATCGCCTCA TGGAGTTGAA ATGCTGTTTG CTATTGGTGC TGGCGACTCA
ATTGTAGCCA CCACCGATTA TGCCGATTTC CCTGCAGCAG CTAAGAATAT TCCGAGTATT
GGTGGTTATT ACGGTATTCA AATCGAGCGA GTGATTGAAC TGAATCCCGA TTTGGTGCTG
GTGTGGCAAA GCGGTAATAA AATGGAAGAC ATTAATCAGT TACGTGATTT AGGTTTTACC
GTTGTGAATA GTGATCCTAA AAGCTTAGCT GATGTTGCCA CGGATATTGA ACTGCTGGGT
AAACTCACCG GACATTCGGT TAAAGCCAAG CAAGTGGCTG ATGACTATCG TCAGCAGTTG
GCTGATATTA CGTTGCAAAA CCAGACGAAA CCTGCGGTAA AAGTGTTCTA TCAATTATGG
TCAACACCAC TGATGACAGT GGCTAAGGGC AGTTGGATAC AAAACCTTAT TGAAGTGTGT
CATGGTGAAA ATGTGTTTTA TGATGCAGCA AGTGAGTACC CACAAATTAG CATCGAAAAT
GTGTTACTAA CCGGCGCTGA AGTGATTTTA CAAAGCCAAG ATGAAGGCAA TATTTTAGGT
ATTAATTGGT CTGACTGGCC TGAGCTACCC GCGGTAAAAA ACCAGCATAT ATATCAGTTT
GATGCCGATT TACTGCATCG GGCAACCCCA AGGGCAATTC AAGGCGTTAA TGCGGTTTGC
GGAGCGTTGG ATAAAGTAAG AAAGTAA
 
Protein sequence
MLRVFLTLIT VIWLSSISLF LPAAEPTASD DLQDKPPAKR IIALSPHGVE MLFAIGAGDS 
IVATTDYADF PAAAKNIPSI GGYYGIQIER VIELNPDLVL VWQSGNKMED INQLRDLGFT
VVNSDPKSLA DVATDIELLG KLTGHSVKAK QVADDYRQQL ADITLQNQTK PAVKVFYQLW
STPLMTVAKG SWIQNLIEVC HGENVFYDAA SEYPQISIEN VLLTGAEVIL QSQDEGNILG
INWSDWPELP AVKNQHIYQF DADLLHRATP RAIQGVNAVC GALDKVRK