Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0895 |
Symbol | |
ID | 4276992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1051732 |
End bp | 1052598 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133661 |
Product | periplasmic binding protein |
Protein accession | YP_749586 |
Protein GI | 114562073 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTACGTG TATTTTTAAC GCTCATCACA GTGATATGGC TCTCGTCTAT ATCACTTTTT TTACCCGCGG CTGAACCGAC GGCTTCTGAT GATTTACAAG ATAAGCCGCC AGCAAAACGG ATTATTGCTC TATCGCCTCA TGGAGTTGAA ATGCTGTTTG CTATTGGTGC TGGCGACTCA ATTGTAGCCA CCACCGATTA TGCCGATTTC CCTGCAGCAG CTAAGAATAT TCCGAGTATT GGTGGTTATT ACGGTATTCA AATCGAGCGA GTGATTGAAC TGAATCCCGA TTTGGTGCTG GTGTGGCAAA GCGGTAATAA AATGGAAGAC ATTAATCAGT TACGTGATTT AGGTTTTACC GTTGTGAATA GTGATCCTAA AAGCTTAGCT GATGTTGCCA CGGATATTGA ACTGCTGGGT AAACTCACCG GACATTCGGT TAAAGCCAAG CAAGTGGCTG ATGACTATCG TCAGCAGTTG GCTGATATTA CGTTGCAAAA CCAGACGAAA CCTGCGGTAA AAGTGTTCTA TCAATTATGG TCAACACCAC TGATGACAGT GGCTAAGGGC AGTTGGATAC AAAACCTTAT TGAAGTGTGT CATGGTGAAA ATGTGTTTTA TGATGCAGCA AGTGAGTACC CACAAATTAG CATCGAAAAT GTGTTACTAA CCGGCGCTGA AGTGATTTTA CAAAGCCAAG ATGAAGGCAA TATTTTAGGT ATTAATTGGT CTGACTGGCC TGAGCTACCC GCGGTAAAAA ACCAGCATAT ATATCAGTTT GATGCCGATT TACTGCATCG GGCAACCCCA AGGGCAATTC AAGGCGTTAA TGCGGTTTGC GGAGCGTTGG ATAAAGTAAG AAAGTAA
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Protein sequence | MLRVFLTLIT VIWLSSISLF LPAAEPTASD DLQDKPPAKR IIALSPHGVE MLFAIGAGDS IVATTDYADF PAAAKNIPSI GGYYGIQIER VIELNPDLVL VWQSGNKMED INQLRDLGFT VVNSDPKSLA DVATDIELLG KLTGHSVKAK QVADDYRQQL ADITLQNQTK PAVKVFYQLW STPLMTVAKG SWIQNLIEVC HGENVFYDAA SEYPQISIEN VLLTGAEVIL QSQDEGNILG INWSDWPELP AVKNQHIYQF DADLLHRATP RAIQGVNAVC GALDKVRK
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