Gene Sfri_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0883 
Symbol 
ID4278640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1037382 
End bp1038743 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content48% 
IMG OID638133649 
Productaldehyde dehydrogenase 
Protein accessionYP_749574 
Protein GI114562061 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAT TAACCTCTTA CGATCCCGCG AGCTATCACT ATGTTGGTGA ACACATTGAA 
GCCACTGCGG TCGGTAGTGT CGAAACAACC GCTATTGAGC AATTACCTAC CGTAATAAAC
AATGCGAAGG TTGCTCAAAA GGCATGGGCA AGCTTGCCTT TAATAGAGCG TCAGCAGTAT
GTGGTAAAAG CGTATCAACA ATTGCACGCA GTGCAAGATG AGCTGGCGAC ACTTATTGGC
CAAGAAATGG GTAAAGATTA TCGTCGGGCC ACTTATGAAG TCGGCGGTAC ATTACAAAAT
GCAGGCTATT TTGCCAGTGA AATCGGTGAT GCATTAGCCA CCGAAGATGT GGGGAATCGC
ACTGAATTAC AATATCGTCC TTTGGGTGTG GTAGCCGTGA TTTCGCCATG GAATTATCCA
CTTGCGATGG CCAATAACTT ATTAATGCCT GCGTTAATTG CAGGTAATAG TGTGGTGTTA
AAGCCGTCTG AAGAAACCCC GCTGGTAGCT GAGTTATTTA TTAATACACT TAACCAGGTG
TTACCACAAC ACGTGCTGCA GGTGGTTCAA GGTGGCAAAG CCCTTGGTCA AGCATTAGTG
GCGGCAGACA TTAACATGGT GGCGTTTACT GGGTCTATGG CCGCAGGTAA ACACATTATG
GCCAATGCGG CGTCTGGCTT AAAACGCCTA GTGATGGAGC TTGGCGGCAA CGATCCTATG
ATTGTGATGG CGGGTGCCAA TATGGATGCC GCGGTGCGCT TTGCTGTAGC CAGTTCGTTT
GAAAATGCAG GGCAAATGTG TACCTCAACT GAACGTGTTT ATGTGGATGA GCGTATTGCC
GATGAGTTTG AGCAAAAAGT GGTAGCGCTT GCCAGTCGGT ATCGTGTTGG TGCATGGGAT
GGTGCAAATG TGAATATTGG TCCAATAGTC AATCCAATCC AACATCAAAA AGTGCTTGAG
CAGTTAAAAG ATGCCAAAGC CAAAGGAGCG AGCTTTTTAT TGGGCAGCGA TGATTATGCA
TTACCGTTTA TTCAACCCAC GGTAGTCAGT AACATCACCC CACAGATGCA ACTCGAAACA
GAAGAAACCT TCGGGCCTGT TGTCGCCATT AGTCGCTTTG GTGACATTGA TGAAGCCATT
AGCCGTGCCA ATAACAGTCA TTATGGTTTA GGTGCAGTGG TATTTGGTGG CCCTAGTGCG
AATGCCGTTG CCGATCAGCT TGACGCTGGC ATGGTAGGGG TTAACCAAGG AGTGGGCGGC
GGAAATGCCC CTTGGGTTGG TGCAAAGCAA AGTGGTTTTG GTTTTCATGG CACGGCTGCT
GGGCATAGAC AATTTGCTCA AGTACGTGTG ATCAGTCGTT AA
 
Protein sequence
MAVLTSYDPA SYHYVGEHIE ATAVGSVETT AIEQLPTVIN NAKVAQKAWA SLPLIERQQY 
VVKAYQQLHA VQDELATLIG QEMGKDYRRA TYEVGGTLQN AGYFASEIGD ALATEDVGNR
TELQYRPLGV VAVISPWNYP LAMANNLLMP ALIAGNSVVL KPSEETPLVA ELFINTLNQV
LPQHVLQVVQ GGKALGQALV AADINMVAFT GSMAAGKHIM ANAASGLKRL VMELGGNDPM
IVMAGANMDA AVRFAVASSF ENAGQMCTST ERVYVDERIA DEFEQKVVAL ASRYRVGAWD
GANVNIGPIV NPIQHQKVLE QLKDAKAKGA SFLLGSDDYA LPFIQPTVVS NITPQMQLET
EETFGPVVAI SRFGDIDEAI SRANNSHYGL GAVVFGGPSA NAVADQLDAG MVGVNQGVGG
GNAPWVGAKQ SGFGFHGTAA GHRQFAQVRV ISR