| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0877 |
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| Symbol | cobS |
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| ID | 4278634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1032356 |
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| End bp | 1033141 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133643 |
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| Product | cobalamin synthase |
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| Protein accession | YP_749568 |
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| Protein GI | 114562055 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGGCG AGATAAAATG GTTGCGGCAG TTAAATTTAT TTTTTGTGGC GATGAGTTTT
TTTACTCGGA TCCCCGTTCC ATCGTGGGTG GTGATTGATA GCGATAAGCT CAACAAAGCT
AGCCGTTATT TTGGTTTAGT GGGTTTACTC ATTGGCTTAA TTTGTGCGTT GGTATTTTGG
CTCGCACAGC TGATTTTACC AGCAAGCATT GCCATTTTAT TAGCCATGGT GGCGGGTGTA
TTAGTGACCG GCGCCTTCCA TGAAGACGGC TTAGCCGATA CCGCAGATGG TTTTGGTGGT
GGTTGGACGG TAGAAGACAA GCTGCGCATC ATGAAAGATT CGCGTTTGGG CAGTTATGGT
GCCTTGTCGC TGGGATTAGT GTTATTGCTA AAATGGCAAT TGCTAGTCGA ACTGGCTTTA
TATAGCCCCA TGGCGGCGGT AAGTGCGCTT GTAGCAGGCC ATACACTTAG CCGTGTTGTG
GCATCAAGCT TGATTTTTAG TGAGCAATAC GTCCGTGATG ACGACACCAG CAAGTCAAAG
CCGATTGCCC AAGATCAGCA ATTAAATGAT TTATTTATTT TAATCGCCAG CGGTATTTTT
GTGTTGTTAT GGCTTAATGG TGTCGCGGCA TTTGTGCTGT TTATTACCTT GTGGCTAGTT
CGCATTTTGT TAGGCGGCTT TTTCCGTAAA CAAATTGGTG GCTACACCGG TGACACACTA
GGGGCTGCGC AGCAAATCAG CGAAGTGTGT TGTTACTTAG TTATTTTAGC GGTTGGATTA
AGCTAA
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| Protein sequence | MSGEIKWLRQ LNLFFVAMSF FTRIPVPSWV VIDSDKLNKA SRYFGLVGLL IGLICALVFW
LAQLILPASI AILLAMVAGV LVTGAFHEDG LADTADGFGG GWTVEDKLRI MKDSRLGSYG
ALSLGLVLLL KWQLLVELAL YSPMAAVSAL VAGHTLSRVV ASSLIFSEQY VRDDDTSKSK
PIAQDQQLND LFILIASGIF VLLWLNGVAA FVLFITLWLV RILLGGFFRK QIGGYTGDTL
GAAQQISEVC CYLVILAVGL S
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