Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0875 |
Symbol | |
ID | 4278632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1030055 |
End bp | 1031161 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638133641 |
Product | transport system permease protein |
Protein accession | YP_749566 |
Protein GI | 114562053 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATG CATCGCAACG TCGCTACTAT GTTTGTTTCA GTCTGTTGGT ATTGGCTACG CTGCTTACCC CGATATTTGC CGCCAGTTTT GGGGCGGCCA ACATTCATCT TAATGACGTA TTAATGATAT TTAATACCTT ATTAGGCGGC GACATGCCGA GTGCGATTGA TGGCAGTGAA CATGCGGTTA CGATAACCCA ACGTATTGTG CTTGAATTAC GCTTACCGCG AATTTTGTTG GCCTTTGTGG CTGGCGCAGG GTTATCTATA GCCGGCAGTG TTTTACAAAC AGTGACCCGC AATCCGTTAG CCGACCCGTA TTTATTTGGC ATTAGCTCCG GGGCGTCATT TGGTGCGGTG TTAGTGGTGT CGTTATTCAG CCAAACCGGT TTATTTGCCG AGATGTTTTC TGGAGTATTG ACCATAGCAC CAAGCTTTAC CGCACAACCT TGGTGGTCTT GGTCGACATT AAGTATACCG ATAGGAGCAT TCATCGGCGC CAGTTTATCA GTGCTGGTAG TGTTTATGTT ATCGGGACCT GGTCGAAGTA GCCAGGTTGA ACGTATGTTG CTGTCTGGTG TGGCAACGTC GTTTCTATTT GGCGCATTGA CCAGCTTGCT GTTGTATTTT TCGACTCCAC AGGCTGCGGC GTCAGTACTG TTTTGGAGCT TAGGCAGTTT TGCTAAAGCC AGTTGGTCTA ATTTACTCTT ACCCAGTGTG ACGGTAGGGG TTAGTTTATT GGTTATGTTG GCGTTCAGGC GGCAAATTAT GGCGCTGCAA GCGGGTGATG AAACGGCTCA TACATTAGGA ATAAATGTCG CTAAATTGCG CTTAAGTATG CTGTTACTGT GTTCGCTTAT TACGGCAATG TTGGTGGCAA CTTGTGGTGG CATTGGTTTT GTTGGTTTGA TGATCCCGCA TACGGTTAGG CTATTATTTT CCGGACGTCA GCCGATGATC TTAACCGCGA TGTTGGGTGG CTTATTTATG GTGTGGATTG ACGTGATAGC ACGATGCATT TTATTTAACC AAGAATTGCC TGTCGGCATT ATTACTGCTG CATTGGGCAG CGTATTTTTC TTGTTTATTT TGCGTCAACG CCGTTAA
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Protein sequence | MIDASQRRYY VCFSLLVLAT LLTPIFAASF GAANIHLNDV LMIFNTLLGG DMPSAIDGSE HAVTITQRIV LELRLPRILL AFVAGAGLSI AGSVLQTVTR NPLADPYLFG ISSGASFGAV LVVSLFSQTG LFAEMFSGVL TIAPSFTAQP WWSWSTLSIP IGAFIGASLS VLVVFMLSGP GRSSQVERML LSGVATSFLF GALTSLLLYF STPQAAASVL FWSLGSFAKA SWSNLLLPSV TVGVSLLVML AFRRQIMALQ AGDETAHTLG INVAKLRLSM LLLCSLITAM LVATCGGIGF VGLMIPHTVR LLFSGRQPMI LTAMLGGLFM VWIDVIARCI LFNQELPVGI ITAALGSVFF LFILRQRR
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