Gene Sfri_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0873 
Symbol 
ID4278630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1028212 
End bp1028955 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content47% 
IMG OID638133639 
Productphosphoglycerate mutase 
Protein accessionYP_749564 
Protein GI114562051 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAG CCAAGATAAT TTTAATGCGC CATGGAGAAT GCGAAGGTGG GTCTATATTT 
CGCGGCCAAA CCGATGTAAA ACTTACCGAC ACAGGGATGG CCCAAATGCA GCAAGCATTT
GCAGAGCTGC AATTCCCCAT TAGCCATGTG TTTAGTTCAC CATTGCAACG GTGCCAGCAA
TTCAGCCAGC CTTTAACGCA GCGATTAACA TTACCGTTAA TGACGATACC AGCACTGCAA
GAAATTGATT TTGGTGTGTG GGATGGGCAA TCGTTTGATG CAATTTACCA GCAAAACCCC
GCTAAATTTG ATGCCTATTG GGATAACCCA TGGTCGGCTG AAAGCACGCC AGATAAAGCC
GAGTCGGTGA TTGATTTTGC TGCGCGAGTG GAGACCGGGC TTATGAGCGT GGTCGATGAA
CTGTGGCGCT CATGTCAACA GCAGCACTCT TGTTTACTGT CAATCGACGA ACAACAAGGG
CAAAACGTGC CGCAAACCGC TCAAGCTGTC GATTGCCCCC ATGCGTTAGT GATTACTCAC
GGCGGCGTTA TGCGCTGCTT AATGGGCTAT GTGCTTAAGG TTGGCCAATC TAGCGGATTA
TTCGCTAACC TAGCGATCCC CTATGCTGCT ATTATGGTGC TCGATGTATA TTGGCCTGAT
GATGTTGATA AGGTTGACGC TTTTCAAGTG ACTGCAATGA ATAACAATAC CGCTAAAGTG
AGCTTTACAT TACATTGGCC GTAA
 
Protein sequence
MKQAKIILMR HGECEGGSIF RGQTDVKLTD TGMAQMQQAF AELQFPISHV FSSPLQRCQQ 
FSQPLTQRLT LPLMTIPALQ EIDFGVWDGQ SFDAIYQQNP AKFDAYWDNP WSAESTPDKA
ESVIDFAARV ETGLMSVVDE LWRSCQQQHS CLLSIDEQQG QNVPQTAQAV DCPHALVITH
GGVMRCLMGY VLKVGQSSGL FANLAIPYAA IMVLDVYWPD DVDKVDAFQV TAMNNNTAKV
SFTLHWP