Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0870 |
Symbol | |
ID | 4278627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1022002 |
End bp | 1023156 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133636 |
Product | lipase, class 3 |
Protein accession | YP_749561 |
Protein GI | 114562048 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAT TATCGCCTAA GTTAGCGTCA GAACTAGCAG CAAATGTTTA TAGTTTAATT GATGCAGAGG ATGCTGACAT ATTTGGAAAT ACCTACATAG AAAAATACTT TGCCATTAAT AGCAAAGGTA TAGGAAAAAC AGGCGGATTT ATTTTTAATC GCCAGTCGGG TTTTGCCGTG ATGGGATTAG GTAAAGGACA ATACCTAGGA GATGCAATCA TCGCTATTCG TGGTACTCAG CTTATTGCAG ATTGGGGAAC CAATGCGCAA CTTGGTTTAA GCGTCGGTGA TGGTAACCAA ATAGTGCACG CTGGATTTAA TAATGCTTTT GTTTCACTAA GACAACAAAT TGCGACTTTT TTGGATAAGT GGCGTATCTC AAATCCTGGT AAAGCGATAC ATTTTGTCGG TCATAGCTTA GGTGGCGCAC TAGCTTCACT AGCTGCAGAC TGGGCATCTG TTAATAATTA CGCTTCAAAT ATTAATTTAT ACACTTTTGG CTCCCCAAGA GTTGGACAAC AAGGTTTTGC CTCGGCTAAC ACCCATAGAT TAAATCAAAT TTTTCGTTGC ACACACGGCG CTGATGTAGT CCCTAAAGTG CCTTTATGGC CTTTTATTCA TGCGCCTTAT CAAGGTGTTG AATATCGCCT AGACAACAGT CAAGGTTTGA GGATTAGTGC TCATGGTATG GATCCTAAAG CTGGGGCTGA ACCAGGTTAT TTAGTCTCTG CAAACACTGA GCATTGGGGC CATTTACATG TTAAAGCTAG CGAATATTTA CAACCGGTTA AATTACGTTA TGAAAACCGT AATCAAGCAA GCTATTCAGA CCAGTGGAGC GACAAACTCA GCGCAGCATT AATTACGGTC TTAAAAGAAG CTGGATATTA TGGCGCAATT GTAGCGCAAG CGACGGCATC TTACGGTTTG ACATTCTACG ATCTCGTCGC CAAAACCCTT GAAAAAATTG CTGCTGCAGC AAGTTCTTTT GCCGACGATG TCAGAGGACT ACTCGGTCAT ATGTTAGCTT TTGCAGGGGC AGTAGTGACT ACCGTAGTTG ACTTAACTTA TGCCACTATT CGAGCCATTT TCAATAAAAT GCTTGCACGC TTATATAGTA GTGTCAAAGA AGCGATTAAA TCTGTACACA AGTAA
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Protein sequence | MNQLSPKLAS ELAANVYSLI DAEDADIFGN TYIEKYFAIN SKGIGKTGGF IFNRQSGFAV MGLGKGQYLG DAIIAIRGTQ LIADWGTNAQ LGLSVGDGNQ IVHAGFNNAF VSLRQQIATF LDKWRISNPG KAIHFVGHSL GGALASLAAD WASVNNYASN INLYTFGSPR VGQQGFASAN THRLNQIFRC THGADVVPKV PLWPFIHAPY QGVEYRLDNS QGLRISAHGM DPKAGAEPGY LVSANTEHWG HLHVKASEYL QPVKLRYENR NQASYSDQWS DKLSAALITV LKEAGYYGAI VAQATASYGL TFYDLVAKTL EKIAAAASSF ADDVRGLLGH MLAFAGAVVT TVVDLTYATI RAIFNKMLAR LYSSVKEAIK SVHK
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