| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0866 |
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| Symbol | |
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| ID | 4278694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1018558 |
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| End bp | 1019370 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133632 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_749557 |
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| Protein GI | 114562044 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATCGAA GTAGCTATAA ATATTGGCTA AAAAGAAAAG AACATATCGA TGCTGACTTT
ACTATTTTAT GCAGTGAAGT GAAGGCCGCG CATCGTATTA GTAATGGCTC TGCCGGTGCT
AGAACGATAG CGCAATTAGT GACTAACAAA GGGATTAATC TCAGTCGTTA TCGAGCCCGT
AATCTAATGA GAAAGCTTGG ATTATTAAGC TGTCAGCAGC CTAAGCATTC TTATAGGAAA
GCTGCACAAG AGCATGTAGC GATCCCAAAC ACGCTTAATC GACAGTTTGC AGTAACTCAA
CCAGATCAAG TGTGGTGTGG CGATGTGACG TATGTTTGGG TCGGTAATCG TTGGGCATAT
TTAGCCGTTG TTTTAGACTT ATTTTCCCGC AAACCTGTTG GGTGGGCTTT GTCATTATCG
CCTGACAGCG AGCTGACCTC TAAAGCCTTG AAAATGGCAT TTGAGTTAAG GGGGAAACCT
GAGAATGTGA TATATCACAG CGACCAAGGT TCACATTACA CAAGCTTGAA ATTCAGACAG
TTATTATGGC GTCTTCAGAT TGAGCAAAGC ATGAGTCGTC GCGGGAATTG TTGGGATAAC
GCACCAATGG AGCGTTTCTT TAGAAGTTTG AAATCTGAAT GGGTACCCGC AAGTGGCTAT
GGGAATTTTA CAGAAGCAGA CAAAGCGATC ACAAATTACA TCACTGGATA TTACAGTGAA
ACTAGACCCC ATCAATATAA TGGTGGGTTA ACTCCAAATG AGTCAGAACG TTTATATTGG
AATGACTCTA AAACCGTGGC CAATATTACT TGA
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| Protein sequence | MHRSSYKYWL KRKEHIDADF TILCSEVKAA HRISNGSAGA RTIAQLVTNK GINLSRYRAR
NLMRKLGLLS CQQPKHSYRK AAQEHVAIPN TLNRQFAVTQ PDQVWCGDVT YVWVGNRWAY
LAVVLDLFSR KPVGWALSLS PDSELTSKAL KMAFELRGKP ENVIYHSDQG SHYTSLKFRQ
LLWRLQIEQS MSRRGNCWDN APMERFFRSL KSEWVPASGY GNFTEADKAI TNYITGYYSE
TRPHQYNGGL TPNESERLYW NDSKTVANIT
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